Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836233 . G A CCDS54068.1:NM_000173.5:c.334Ggg>Agg_NP_000164.5:p.112G>R Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 GLY A:96 G:96 32.0 0.427 T -43.8 -65.2 32.0 0.427 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 GLY D:96 G:96 3.0 0.04 T -48.9 -81.5 3.0 0.04 0.0 HOH
 3.098
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 GLY A:96 G:96 8.0 0.107 T -51.8 -43.1 8.0 0.107 0.0 HOH
 2.838
 N
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 GLY A:96 A:96 14.0 0.187 T -45.7 -50.1 14.0 0.187 0.0 HOH
 2.848
 N
 O
GLY B:96 G:96 6.0 0.08 T -33.3 -46.7 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 GLY C:96 G:96 5.0 0.067 T -49.3 -79.4 5.0 0.067 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 GLY A:96 A:96 5.0 0.067 T -43.3 -51.8 5.0 0.067 0.0 HOH
 2.735
 O
 O
GLY B:96 B:96 9.0 0.12 T -45.4 -48.0 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 GLY B:96 B:96 4.0 0.053 T -24.0 -72.8 4.0 0.053 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 GLY B:96 B:96 6.0 0.08 T -48.8 -35.9 6.0 0.08 0.0 HOH
 2.927
 N
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 GLY B:96 B:96 7.0 0.093 T -58.7 -38.7 7.0 0.093 0.0 HOH
 2.785
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 GLY B:96 B:96 12.0 0.16 T -70.2 -49.1 12.0 0.16 0.0
GLY D:96 D:96 6.0 0.08 T -75.9 -43.3 NA NA NA
GLY F:96 F:96 8.0 0.107 T -73.1 -45.5 NA NA NA
GLY H:96 H:96 20.0 0.267 T -75.1 -42.7 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 GLY A:97 A:112 4.0 0.053 T -50.5 -26.5 4.0 0.053 0.0 HOH
 3.608
 N
 O
GLY B:97 B:112 4.0 0.053 T -36.2 -42.0 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 GLY A:96 A:96 10.0 0.133 T -45.5 -45.3 10.0 0.133 0.0 HOH
 2.830
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 GLY D:96 D:96 11.0 0.147 T -42.1 -52.6 11.0 0.147 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 GLY A:96 A:96 15.0 0.2 T -67.5 -22.5 15.0 0.2 0.0 HOH
 2.850
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 GLY A:112 A:112 7.0 0.093 T -65.9 -21.5