Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836254 . A C CCDS54068.1:NM_000173.5:c.355Acc>Ccc_NP_000164.5:p.119T>P Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 THR A:103 G:103 34.0 0.243 -112.1 -39.6 34.0 0.243 0.0 HOH
 6.774
 O
 O
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 THR D:103 G:103 32.0 0.229 -120.2 -24.3 32.0 0.229 0.0 HOH
 4.748
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 THR A:103 G:103 38.0 0.271 -115.3 -23.1 38.0 0.271 0.0 HOH
 3.554
 CG2
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 THR A:103 A:103 37.0 0.264 -107.7 -20.5 37.0 0.264 0.0 HOH
 5.343
 N
 O
THR B:103 G:103 38.0 0.271 -111.3 -37.2 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 THR C:103 G:103 39.0 0.279 -131.0 -20.9 39.0 0.279 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 THR A:103 A:103 37.0 0.264 -117.7 -24.0 37.0 0.264 0.0 HOH
 3.008
 OG1
 O
THR B:103 B:103 38.0 0.271 -117.4 -23.3 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 THR B:103 B:103 36.0 0.257 -118.4 -19.3 24.0 0.171 0.086 A:P04275:0.086
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 THR B:103 B:103 35.0 0.25 -116.0 -22.4 35.0 0.25 0.0 HOH
 2.751
 OG1
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 THR B:103 B:103 35.0 0.25 -119.3 -22.6 22.0 0.157 0.093 A:P04275:0.093
 PEG
HOH
 8.955
2.858
 O
OG1
 C4
O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 THR B:103 B:103 39.0 0.279 -113.2 -23.9 37.0 0.264 0.015 A:P04275:0.014
THR D:103 D:103 36.0 0.257 -110.9 -24.2 NA NA NA
THR F:103 F:103 40.0 0.286 -105.1 -36.0 NA NA NA
THR H:103 H:103 46.0 0.329 -107.8 -38.0 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 THR A:104 A:119 42.0 0.3 -119.7 -16.9 42.0 0.3 0.0 HOH
 3.043
 OG1
 O
THR B:104 B:119 39.0 0.279 -115.3 -25.2 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 THR A:103 A:103 41.0 0.293 -119.4 -19.7 41.0 0.293 0.0 HOH
 4.980
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 THR D:103 D:103 36.0 0.257 -113.6 -32.8 23.0 0.164 0.093 A:P04275:0.093
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 THR A:103 A:103 39.0 0.279 -114.8 -22.3 39.0 0.279 0.0 HOH
 2.625
 OG1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 THR A:119 A:119 39.0 0.279 -105.9 -32.8