Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836312 . G A CCDS54068.1:NM_000173.5:c.413gGt>gAt_NP_000164.5:p.138G>D Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 GLY A:122 G:122 43.0 0.573 S 52.3 35.2 43.0 0.573 0.0 HOH
 7.367
 C
 O
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 GLY D:122 G:122 45.0 0.6 T 89.6 5.5 45.0 0.6 0.0 HOH
 4.513
 O
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 GLY A:122 G:122 42.0 0.56 T 90.6 -9.4 42.0 0.56 0.0 HOH
 2.884
 N
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 GLY A:122 A:122 52.0 0.693 T 84.1 -26.2 52.0 0.693 0.0 HOH
 3.124
 N
 O
GLY B:122 G:122 43.0 0.573 T 104.8 -8.0 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 GLY C:122 G:122 47.0 0.627 T 119.6 -48.6 47.0 0.627 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 GLY A:122 A:122 45.0 0.6 T 89.2 -9.9 45.0 0.6 0.0 HOH
 2.726
 O
 O
GLY B:122 B:122 49.0 0.653 T 89.0 -11.4 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 GLY B:122 B:122 47.0 0.627 T 89.3 4.4 47.0 0.627 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 GLY B:122 B:122 39.0 0.52 T 94.5 -12.6 39.0 0.52 0.0 HOH
 2.467
 N
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 GLY B:122 B:122 45.0 0.6 T 89.2 -7.9 45.0 0.6 0.0 HOH
 2.799
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 GLY B:122 B:122 44.0 0.587 T 115.8 1.3 44.0 0.587 0.0
GLY D:122 D:122 49.0 0.653 T 92.5 23.5 NA NA NA
GLY F:122 F:122 45.0 0.6 T 105.2 5.2 NA NA NA
GLY H:122 H:122 51.0 0.68 T 98.2 -1.5 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 GLY A:123 A:138 41.0 0.547 S 98.1 -35.6 41.0 0.547 0.0 HOH
 4.699
 O
 O
GLY B:123 B:138 35.0 0.467 T 96.7 -17.7 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 GLY A:122 A:122 43.0 0.573 T 88.1 -5.6 41.0 0.547 0.026 C:P00734:0.027
 HOH
 2.861
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 GLY D:122 D:122 34.0 0.453 T 114.0 -9.9 34.0 0.453 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 GLY A:122 A:122 48.0 0.64 T 89.6 -4.6 48.0 0.64 0.0 HOH
 3.234
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 GLY A:138 A:138 44.0 0.587 T 99.7 -11.8