Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836360 . C A CCDS54068.1:NM_000173.5:c.461aCc>aAc_NP_000164.5:p.154T>N Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 THR A:138 G:138 72.0 0.514 -155.4 135.2 72.0 0.514 0.0 HOH
 8.968
 CG2
 O
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 THR D:138 G:138 72.0 0.514 -145.1 144.0 72.0 0.514 0.0 NAG
HOH
 9.288
2.619
 N
O
 C8
O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 THR A:138 G:138 75.0 0.536 -145.4 165.7 75.0 0.536 0.0 HOH
 2.688
 O
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 THR A:138 A:138 79.0 0.564 -159.4 148.6 79.0 0.564 0.0 NAG
HOH
 9.187
3.260
 N
OG1
 C8
O
THR B:138 G:138 67.0 0.479 -138.7 178.9 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 THR C:138 G:138 81.0 0.579 -147.5 152.6 81.0 0.579 0.0 NAG
 8.895
 N
 C8
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 THR A:138 A:138 78.0 0.557 S -142.9 164.2 78.0 0.557 0.0 HOH
 2.616
 OG1
 O
THR B:138 B:138 80.0 0.571 S -143.4 169.3 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 THR B:138 B:138 70.0 0.5 S -140.7 173.8 70.0 0.5 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 THR B:138 B:138 70.0 0.5 -144.7 172.9 70.0 0.5 0.0 HOH
 2.848
 O
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 THR B:138 B:138 77.0 0.55 -136.9 167.4 77.0 0.55 0.0 HOH
 2.557
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 THR B:138 B:138 79.0 0.564 -132.5 171.2 79.0 0.564 0.0 SO4
 9.435
 C
 O2
THR D:138 D:138 81.0 0.579 -129.9 176.7 NA NA NA
THR F:138 F:138 63.0 0.45 -131.9 176.3 NA NA NA
THR H:138 H:138 56.0 0.4 -132.3 -178.5 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 THR A:139 A:154 85.0 0.607 -149.0 160.3 85.0 0.607 0.0 NAG
HOH
 9.278
8.521
 N
OG1
 N2
O
THR B:139 B:154 79.0 0.564 -146.2 147.6 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 THR A:138 A:138 69.0 0.493 -145.6 171.3 69.0 0.493 0.0 HOH
 2.873
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 THR D:138 D:138 64.0 0.457 S -151.6 149.4 64.0 0.457 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 THR A:138 A:138 60.0 0.429 -152.0 -169.5 60.0 0.429 0.0 HOH
 2.586
 OG1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 THR A:154 A:154 67.0 0.479 -145.0 165.0