Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836381 . C A CCDS54068.1:NM_000173.5:c.482aCg>aAg_NP_000164.5:p.161T>K Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 THR A:145 G:145 81.0 0.579 T -66.2 -52.9 81.0 0.579 0.0 HOH
 6.696
 O
 O
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 THR D:145 G:145 96.0 0.686 T -55.6 -44.2 96.0 0.686 0.0 HOH
 3.351
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 THR A:145 G:145 110.0 0.786 T -63.7 -28.0 110.0 0.786 0.0 HOH
 2.714
 OG1
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 THR A:145 A:145 104.0 0.743 T -63.9 -45.5 104.0 0.743 0.0 HOH
 6.181
 C
 O
THR B:145 G:145 105.0 0.75 T -72.8 -31.8 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 THR C:145 G:145 93.0 0.664 T -42.8 -50.9 93.0 0.664 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 THR A:145 A:145 107.0 0.764 T -61.7 -38.8 107.0 0.764 0.0 HOH
 2.671
 OG1
 O
THR B:145 B:145 105.0 0.75 T -58.7 -39.1 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 THR B:145 B:145 98.0 0.7 T -64.7 -48.4 98.0 0.7 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 THR B:145 B:145 98.0 0.7 S -68.6 -46.3 98.0 0.7 0.0 HOH
 2.923
 OG1
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 THR B:145 B:145 103.0 0.736 T -61.8 -45.3 103.0 0.736 0.0 HOH
 3.526
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 THR B:145 B:145 95.0 0.679 T -63.5 -48.5 95.0 0.679 0.0 SO4
HOH
 6.648
3.460
 OG1
O
 O3
O
THR D:145 D:145 95.0 0.679 T -64.9 -40.8 NA NA NA
THR F:145 F:145 104.0 0.743 T -61.9 -47.3 NA NA NA
THR H:145 H:145 97.0 0.693 T -64.5 -48.4 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 THR A:146 A:161 111.0 0.793 T -56.4 -42.2 111.0 0.793 0.0 HOH
 3.384
 O
 O
THR B:146 B:161 103.0 0.736 T -52.0 -45.4 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 THR A:145 A:145 98.0 0.7 T -61.4 -32.8 31.0 0.221 0.479 C:P00734:0.479
 MES
HOH
 9.427
3.139
 OG1
CB
 O2S
O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 THR D:145 D:145 99.0 0.707 S -60.6 -55.2 99.0 0.707 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 THR A:145 A:145 107.0 0.764 T -58.0 -46.9 107.0 0.764 0.0 HOH
 3.359
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 THR A:161 A:161 104.0 0.743 T -53.0 -38.7