Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836573 . G A CCDS54068.1:NM_000173.5:c.674tGc>tAc_NP_000164.5:p.225C>Y Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 CYS A:209 G:209 20.0 0.148 -83.9 108.6 20.0 0.148 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS D:209 G:209 23.0 0.17 -85.4 97.7 23.0 0.17 0.0 HOH
 5.669
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS A:209 G:209 25.0 0.185 -88.0 92.5 25.0 0.185 0.0 HOH
 2.584
 O
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 CYS A:209 A:209 21.0 0.156 -84.7 84.0 21.0 0.156 0.0 HOH
 4.983
 N
 O
CYS B:209 G:209 23.0 0.17 -88.8 92.0 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 CYS C:209 G:209 26.0 0.193 -83.1 94.8 26.0 0.193 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 CYS A:209 A:209 6.0 0.044 -85.8 106.5 6.0 0.044 0.0 HOH
 2.837
 O
 O
CYS B:209 B:209 22.0 0.163 -86.0 91.3 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 CYS B:209 B:209 22.0 0.163 -75.7 77.9 22.0 0.163 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 CYS B:209 B:209 27.0 0.2 -75.6 99.2 27.0 0.2 0.0 HOH
 2.851
 N
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:209 B:209 26.0 0.193 -85.8 87.4 26.0 0.193 0.0 HOH
 3.105
 N
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:209 B:209 9.0 0.067 -88.9 87.1 9.0 0.067 0.0
CYS D:209 D:209 16.0 0.119 -74.6 82.7 NA NA NA
CYS F:209 F:209 5.0 0.037 -104.0 88.2 NA NA NA
CYS H:209 H:209 21.0 0.156 -89.8 91.1 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 CYS A:210 A:225 7.0 0.052 -75.4 122.5 7.0 0.052 0.0 HOH
 5.726
 SG
 O
CYS B:210 B:225 19.0 0.141 -88.5 102.8 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 CYS A:209 A:209 24.0 0.178 -81.4 95.9 24.0 0.178 0.0 HOH
 3.969
 O
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 CYS D:209 D:209 23.0 0.17 -79.4 86.5 23.0 0.17 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 CYS A:209 A:209 34.0 0.252 -88.8 83.0 34.0 0.252 0.0 CL
HOH
 6.945
3.108
 C
N
 CL
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 CYS A:225 A:225 3.0 0.022 -82.3 89.4