Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836611 . G A CCDS54068.1:NM_000173.5:c.712Gac>Aac_NP_000164.5:p.238D>N Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 ASP A:222 G:222 86.0 0.573 H -79.1 -7.8 40.0 0.267 0.306 B:Q8JIV9:0.307
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 ASP D:222 G:222 106.0 0.707 H -60.2 -44.4 30.0 0.2 0.507 B:P00734:0.507
 HOH
 2.588
 O
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 ASP A:222 G:222 92.0 0.613 H -77.3 -16.0 92.0 0.613 0.0 HOH
 2.758
 OD2
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 ASP A:222 A:222 105.0 0.7 H -57.6 -31.3 105.0 0.7 0.0 HOH
 3.044
 OD2
 O
ASP B:222 G:222 128.0 0.853 H -63.9 -27.7 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 ASP C:222 G:222 101.0 0.673 H -60.5 -50.5 30.0 0.2 0.473 B:P00734:0.473
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 ASP A:222 A:222 131.0 0.873 H -75.2 -16.7 131.0 0.873 0.0 HOH
 2.684
 OD1
 O
ASP B:222 B:222 109.0 0.727 H -74.0 -22.8 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 ASP B:222 B:222 109.0 0.727 T -86.3 5.4 109.0 0.727 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 ASP B:222 B:222 118.0 0.787 H -80.3 -14.0 118.0 0.787 0.0 HOH
 2.659
 OD1
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 ASP B:222 B:222 93.0 0.62 H -80.8 -19.3 93.0 0.62 0.0 HOH
 3.655
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 ASP B:222 B:222 102.0 0.68 H -97.2 -21.5 102.0 0.68 0.0
ASP D:222 D:222 104.0 0.693 H -98.9 -18.5 NA NA NA
ASP F:222 F:222 98.0 0.653 H -95.2 -29.3 NA NA NA
ASP H:222 H:222 96.0 0.64 H -95.7 -18.3 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 ASP A:223 A:238 103.0 0.687 H -67.8 -22.4 103.0 0.687 0.0 HOH
 3.323
 O
 O
ASP B:223 B:238 87.0 0.58 H -70.5 -14.4 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 ASP A:222 A:222 94.0 0.627 H -70.0 -24.0 69.0 0.46 0.167 C:P00734:0.167
 HOH
 3.105
 O
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 ASP D:222 D:222 93.0 0.62 H -83.9 -23.6 41.0 0.273 0.347 C:P22030:0.347
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 ASP A:222 A:222 128.0 0.853 H -70.4 -6.0 128.0 0.853 0.0 HOH
 2.279
 OD1
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 ASP A:238 A:238 77.0 0.513 H -76.7 -24.7