Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836636 . G A CCDS54068.1:NM_000173.5:c.737tGg>tAg_NP_000164.5:p.246W>* Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 TRP A:230 G:230 100.0 0.392 -70.5 128.3 84.0 0.329 0.063 C:Q8AYA3:0.063
 HOH
 7.378
 CZ2
 O
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 TRP D:230 G:230 95.0 0.373 -67.5 134.4 95.0 0.373 0.0 HOH
 3.008
 CZ3
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 TRP A:230 G:230 90.0 0.353 -69.4 140.5 90.0 0.353 0.0 HOH
 2.512
 O
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 TRP A:230 A:230 60.0 0.235 -70.4 141.0 60.0 0.235 0.0 PT
HOH
 8.219
3.458
 CZ2
CD1
 PT
O
TRP B:230 G:230 69.0 0.271 -59.0 132.1 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 TRP C:230 G:230 98.0 0.384 -65.1 132.8 98.0 0.384 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 TRP A:230 A:230 113.0 0.443 -70.1 136.7 113.0 0.443 0.0 HOH
 2.486
 O
 O
TRP B:230 B:230 92.0 0.361 -67.3 138.3 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 TRP B:230 B:230 71.0 0.278 E -108.0 118.1 71.0 0.278 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 TRP B:230 B:230 45.0 0.176 E -107.6 117.8 45.0 0.176 0.0 HOH
 3.223
 CE2
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 TRP B:230 B:230 50.0 0.196 E -102.7 128.7 50.0 0.196 0.0 PEG
HOH
 6.836
2.907
 NE1
O
 O1
O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 TRP B:230 B:230 63.0 0.247 E -104.6 107.5 63.0 0.247 0.0 HOH
 5.776
 O
 O
TRP D:230 D:230 63.0 0.247 E -104.2 108.6 NA NA NA
TRP F:230 F:230 46.0 0.18 E -111.6 110.0 NA NA NA
TRP H:230 H:230 66.0 0.259 E -102.3 107.3 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 TRP A:231 A:246 119.0 0.467 -82.0 120.0 119.0 0.467 0.0 PT
HOH
 4.933
3.508
 CZ3
NE1
 PT
O
TRP B:231 B:246 95.0 0.373 -52.7 114.5 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 TRP A:230 A:230 76.0 0.298 -67.7 141.7 76.0 0.298 0.0 HOH
 3.239
 CH2
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 TRP D:230 D:230 55.0 0.216 E -89.9 135.7 55.0 0.216 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 TRP A:230 A:230 88.0 0.345 -70.4 129.2 38.0 0.149 0.196 B:None:0.196
 HOH
 2.200
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 TRP A:246 A:246 75.0 0.294 -65.1 129.7