Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836645 . G A CCDS54068.1:NM_000173.5:c.746gGt>gAt_NP_000164.5:p.249G>D Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 GLY A:233 G:233 87.0 1.0 S -102.5 36.6 87.0 1.0 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 GLY D:233 G:233 40.0 0.533 S -87.3 164.8 40.0 0.533 0.0 HOH
 7.118
 CA
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 GLY A:233 G:233 71.0 0.947 T 74.7 7.6 71.0 0.947 0.0 HOH
 3.875
 CA
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 GLY A:233 A:233 51.0 0.68 S 89.5 18.1 51.0 0.68 0.0 PT
HOH
 8.912
8.933
 N
N
 PT
O
GLY B:233 G:233 53.0 0.707 S 94.7 25.9 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 GLY C:233 G:233 41.0 0.547 T -71.5 169.8 41.0 0.547 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 GLY A:233 A:233 64.0 0.853 -177.3 -100.0 64.0 0.853 0.0 HOH
 3.566
 C
 O
GLY B:233 B:233 91.0 1.0 T 81.7 -7.5 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 GLY B:233 B:233 38.0 0.507 -136.9 46.2 38.0 0.507 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 GLY B:233 B:233 31.0 0.413 -157.4 -172.1 31.0 0.413 0.0 HOH
 2.722
 O
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:233 B:233 83.0 0.535 E -111.2 125.8 79.0 0.51 0.025 A:P04275:0.026
 HOH
 4.606
 CB
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:233 B:233 91.0 0.587 E -120.8 126.3 91.0 0.587 0.0 HOH
 3.354
 CG2
 O
VAL D:233 D:233 81.0 0.523 E -128.6 123.9 NA NA NA
VAL F:233 F:233 88.0 0.568 E -122.7 118.0 NA NA NA
VAL H:233 H:233 98.0 0.632 E -114.7 116.9 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 GLY A:234 A:249 75.0 1.0 S -104.2 24.7 75.0 1.0 0.0 PT
HOH
 6.754
7.745
 C
N
 PT
O
GLY B:234 B:249 73.0 0.973 S -67.9 65.6 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 GLY A:233 A:233 80.0 1.0 T 81.9 20.1 80.0 1.0 0.0 HOH
 6.035
 N
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 GLY D:233 D:233 30.0 0.4 -176.7 48.4 30.0 0.4 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 GLY A:233 A:233 89.0 1.0 T 80.1 3.2 60.0 0.8 0.2 B:None:0.387
 HOH
 3.320
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 GLY A:249 A:249 86.0 1.0 T 78.8 7.2