Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836662 . A C CCDS54068.1:NM_000173.5:c.763Atg>Ctg_NP_000164.5:p.255M>L Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 MET A:239 G:239 56.0 0.303 -106.7 80.1 3.0 0.016 0.287 C:Q8AYA3:0.286
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 MET D:239 G:239 124.0 0.67 S -110.5 115.1 124.0 0.67 0.0 HOH
 6.397
 C
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 MET A:239 G:239 47.0 0.254 -28.3 128.8 47.0 0.254 0.0 HOH
 3.424
 O
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 MET A:239 A:239 124.0 0.67 S 155.6 137.7 124.0 0.67 0.0 HOH
 7.425
 O
 O
MET B:239 G:239 90.0 0.486 S -135.6 138.8 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 MET C:239 G:239 110.0 0.595 S -108.1 114.8 95.0 0.514 0.081 B:P00734:0.081
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 MET A:239 A:239 118.0 0.638 360.0 -129.1 118.0 0.638 0.0 HOH
 2.900
 N
 O
MET B:239 B:239 53.0 0.286 S -141.1 176.2 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 VAL B:239 B:239 68.0 0.439 E -112.0 106.3 8.0 0.052 0.387 A:P04275:0.387
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 MET B:239 B:239 104.0 0.562 E -129.4 120.2 16.0 0.086 0.476 A:P04275:0.476
 HOH
 3.426
 O
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:239 B:239 69.0 0.445 E -126.9 113.4 8.0 0.052 0.393 A:P04275:0.394
 PEG
HOH
 9.369
2.720
 CG2
O
 O1
O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:239 B:239 73.0 0.471 E -128.0 112.0 13.0 0.084 0.387 A:P04275:0.387
VAL D:239 D:239 71.0 0.458 E -132.0 111.1 NA NA NA
VAL F:239 F:239 70.0 0.452 E -126.6 109.3 NA NA NA
VAL H:239 H:239 68.0 0.439 E -126.2 115.0 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 MET A:240 A:255 37.0 NA -82.9 149.9 37.0 NA NA PT
 4.092
 CB
 PT
MET B:240 B:255 35.0 NA -103.1 122.2 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 MET A:239 A:239 10.0 0.054 S -56.2 162.7 10.0 0.054 0.0 HOH
 4.135
 O
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 MET D:239 D:239 80.0 0.432 E -142.8 119.3 9.0 0.049 0.383 A:P04275:0.384
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 MET A:239 A:239 15.0 0.081 S -92.5 151.6 14.0 0.076 0.005 B:None:0.005
 HOH
 3.274
 CE
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 MET A:255 A:255 10.0 0.054 S -70.4 145.2