Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836674 . G A CCDS54068.1:NM_000173.5:c.775Gtg>Atg_NP_000164.5:p.259V>M Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 VAL A:243 G:243 16.0 0.103 G -77.1 -26.1 16.0 0.103 0.0
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 VAL D:243 G:243 15.0 0.097 G -58.1 -34.3 15.0 0.097 0.0 HOH
 2.871
 O
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 VAL A:243 G:243 15.0 0.097 G -61.7 -28.6 15.0 0.097 0.0 HOH
 2.705
 O
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 VAL A:243 A:243 13.0 0.084 G -70.8 -13.8 13.0 0.084 0.0 HOH
 3.148
 N
 O
VAL B:243 G:243 13.0 0.084 G -61.7 -20.9 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 VAL C:243 G:243 15.0 0.097 G -66.7 -17.6 15.0 0.097 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 VAL A:243 A:243 14.0 0.09 G -60.3 -28.0 14.0 0.09 0.0 HOH
 2.811
 O
 O
VAL B:243 B:243 14.0 0.09 G -58.4 -30.5 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 VAL B:243 B:243 12.0 0.077 G -65.1 -25.9 12.0 0.077 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 VAL B:243 B:243 16.0 0.103 G -61.7 -30.3 16.0 0.103 0.0 HOH
 2.911
 O
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:243 B:243 17.0 0.11 G -64.3 -25.2 17.0 0.11 0.0 HOH
 2.733
 O
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 VAL B:243 B:243 18.0 0.116 G -69.3 -19.4 18.0 0.116 0.0
VAL D:243 D:243 16.0 0.103 G -69.1 -20.0 NA NA NA
VAL F:243 F:243 17.0 0.11 G -66.1 -22.3 NA NA NA
VAL H:243 H:243 17.0 0.11 G -69.2 -22.4 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 VAL A:244 A:259 12.0 0.077 G -59.4 -22.1 12.0 0.077 0.0 HOH
 2.917
 N
 O
VAL B:244 B:259 15.0 0.097 G -56.6 -38.1 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 VAL A:243 A:243 14.0 0.09 G -66.2 -21.5 14.0 0.09 0.0 HOH
 2.706
 O
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 VAL D:243 D:243 17.0 0.11 G -64.0 -20.8 11.0 0.071 0.039 C:P22030:0.039
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 VAL A:243 A:243 17.0 0.11 G -57.0 -21.7 17.0 0.11 0.0 HOH
 2.593
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 VAL A:259 A:259 18.0 0.116 G -60.5 -25.9