Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 4836691 . T A CCDS54068.1:NM_000173.5:c.792tgT>tgA_NP_000164.5:p.264C>* Homo sapiens glycoprotein Ib (platelet), alpha polypeptide (GP1BA), mRNA.
pdb_id: 
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auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6xfq 1 P07359 99.34 0.0 X-RAY
 2021-06-23 CYS A:248 G:248 9.0 0.067 B -67.1 123.8 9.0 0.067 0.0 HOH
 7.807
 O
 O
1ook 4 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS D:248 G:248 13.0 0.096 B -64.3 138.9 13.0 0.096 0.0 HOH
 5.734
 N
 O
1p9a 1 P07359 99.66 0.0 X-RAY
 2003-07-22 CYS A:248 G:248 11.0 0.081 B -62.5 127.5 11.0 0.081 0.0 HOH
 3.912
 SG
 O
1qyy 1 P07359 99.66 0.0 X-RAY
 2004-03-02 CYS A:248 A:248 12.0 0.089 G -65.6 114.0 12.0 0.089 0.0 HOH
 5.571
 N
 O
CYS B:248 G:248 13.0 0.096 B -68.7 117.3 NA NA NA
3pmh 3 P07359 99.66 0.0 X-RAY
 2011-06-01 CYS C:248 G:248 11.0 0.081 B -65.3 125.4 11.0 0.081 0.0
1m0z 1 P07359 99.31 0.0 X-RAY
 2002-08-28 CYS A:248 A:248 6.0 0.044 B -72.3 129.0 6.0 0.044 0.0 HOH
 2.760
 O
 O
CYS B:248 B:248 4.0 0.03 B -66.7 136.3 NA NA NA
1m10 2 P07359 98.97 0.0 X-RAY
 2002-08-28 CYS B:248 B:248 2.0 0.015 -68.8 127.3 2.0 0.015 0.0
1sq0 2 P07359 99.31 0.0 X-RAY
 2004-04-13 CYS B:248 B:248 8.0 0.059 B -60.3 136.0 8.0 0.059 0.0 HOH
 3.771
 CB
 O
4c2a 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:248 B:248 13.0 0.096 B -70.6 134.2 13.0 0.096 0.0 HOH
 3.787
 CB
 O
4c2b 2 P07359 98.28 0.0 X-RAY
 2014-01-08 CYS B:248 B:248 13.0 0.096 B -70.7 149.7 13.0 0.096 0.0
CYS D:248 D:248 1.0 0.007 E -80.4 105.9 NA NA NA
CYS F:248 F:248 15.0 0.111 B -72.3 158.8 NA NA NA
CYS H:248 H:248 21.0 0.156 -84.3 -17.1 NA NA NA
1gwb 1 P07359 100.0 0.0 X-RAY
 2003-02-06 CYS A:249 A:264 2.0 0.015 E -78.1 125.5 2.0 0.015 0.0 HOH
 6.035
 SG
 O
CYS B:249 B:264 6.0 0.044 B -67.5 131.5 NA NA NA
1p8v 1 P07359 99.64 0.0 X-RAY
 2003-07-22 CYS A:248 A:248 6.0 0.044 B -72.5 134.5 6.0 0.044 0.0 HOH
 3.950
 CB
 O
1u0n 4 P07359 99.25 0.0 X-RAY
 2005-04-19 CYS D:248 D:248 5.0 0.037 S -66.0 122.0 5.0 0.037 0.0
3p72 1 P07359 99.25 0.0 X-RAY
 2010-11-24 CYS A:248 A:248 8.0 0.059 B -51.1 125.3 8.0 0.059 0.0 HOH
 3.648
 C
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07359-f1 1 P07359 100.0 0.0 CYS A:264 A:264 2.0 0.015 B -67.4 133.7