Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 5271763 . G A CCDS42243.1:NM_001083585.1:c.1884atG>atA_NP_001077054.1:p.628M>I Homo sapiens rabaptin, RAB GTPase binding effector protein 1 (RABEP1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1x79 2 Q15276 100.0 6e-65 X-RAY
 2004-10-12 MET B:79 B:628 90.0 0.486 H -65.4 -43.4 90.0 0.486 0.0 DTT
HOH
 8.743
3.836
 O
CB
 S4
O
MET C:79 C:628 96.0 0.519 H -54.1 -54.3 96.0 0.519 0.0 DTT
HOH
 7.651
3.112
 O
CE
 O2
O
4n3y 2 Q15276 100.0 2e-50 X-RAY
 2014-07-23 MET B:78 B:628 114.0 0.616 H -70.0 -33.8 28.0 0.151 0.465 C:Q15276:0.157
A:Q9UJ41:0.362
 HOH
 3.255
 CE
 O
MET C:78 C:628 101.0 0.546 H -72.5 -34.8 7.0 0.038 0.508 B:Q15276:0.476
A:Q9UJ41:0.081
 HOH
 4.768
 CB
 O
4n3z 2 Q15276 100.0 2e-50 X-RAY
 2014-07-23 MET B:78 B:628 104.0 0.562 H -61.3 -40.1 13.0 0.07 0.492 C:Q15276:0.173
A:Q9UJ41:0.368
 PO4
 8.222
 N
 O4
MET C:78 C:628 92.0 0.497 H -64.1 -31.6 4.0 0.022 0.475 B:Q15276:0.443
A:Q9UJ41:0.103
 PO4
 3.496
 C
 O1
4q9u 3 Q15276 100.0 2e-50 X-RAY
 2014-07-23 MET C:78 C:628 103.0 0.557 H -71.4 -21.9 11.0 0.059 0.498 A:Q9UJ41:0.076
D:Q15276:0.465
E:Q9UJ41:0.022
MET D:78 D:628 87.0 0.47 H -79.0 -15.4 44.0 0.238 0.232 C:Q15276:0.124
A:Q9UJ41:0.103
E:Q9UJ41:0.005
MET G:78 G:628 126.0 0.681 T -77.0 -17.7 29.0 0.157 0.524 H:Q15276:0.395
E:Q9UJ41:0.168
MET H:78 H:628 86.0 0.465 H -77.5 -15.7 42.0 0.227 0.238 G:Q15276:0.081
E:Q9UJ41:0.189

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q15276-f1 1 Q15276 100.0 0.0 MET A:628 A:628 110.0 0.595 H -62.3 -40.7