Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 5276643 | . | A | C | CCDS42243.1:NM_001083585.1:c.1919gAa>gCa_NP_001077054.1:p.640E>A | Homo sapiens rabaptin, RAB GTPase binding effector protein 1 (RABEP1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
1x79 | 2 | Q15276 | 100.0 | 6e-65 |
X-RAY |
2004-10-12 | GLU | B:91 | B:640 | 150.0 | 0.789 | T | -81.0 | 45.0 | 150.0 | 0.789 | 0.0 |
HOH |
4.664 |
O |
O |
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GLU | C:91 | C:640 | 185.0 | 0.974 | -65.0 | 360.0 | 185.0 | 0.974 | 0.0 | ||||||||||||||
4n3y | 2 | Q15276 | 100.0 | 2e-50 |
X-RAY |
2014-07-23 | GLU | B:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLU | C:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4n3z | 2 | Q15276 | 100.0 | 2e-50 |
X-RAY |
2014-07-23 | GLU | B:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLU | C:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
4q9u | 3 | Q15276 | 100.0 | 2e-50 |
X-RAY |
2014-07-23 | GLU | C:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLU | D:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
GLU | G:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
GLU | H:90 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q15276-f1 | 1 | Q15276 | 100.0 | 0.0 | GLU | A:640 | A:640 | 122.0 | 0.642 | H | -63.8 | -42.7 |