Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 62474105 | . | C | A | CCDS32706.1:NM_007215.3:c.1293aaG>aaT_NP_009146.2:p.431K>N | Homo sapiens DNA polymerase gamma 2, accessory subunit (POLG2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c51 | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2016-05-11 | LYS | B:431 | B:431 | 64.0 | 0.32 | H | -65.6 | -32.1 | 61.0 | 0.305 | 0.015 |
C:Q9UHN1:0.015 |
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LYS | C:431 | C:431 | 61.0 | 0.305 | H | -64.1 | -40.1 | 61.0 | 0.305 | 0.0 | |||||||||||||
5c52 | 2 | Q9UHN1 | 99.79 | 0.0 |
X-RAY |
2016-05-11 | LYS | B:431 | B:431 | 63.0 | 0.315 | H | -66.0 | -33.3 | 60.0 | 0.3 | 0.015 |
C:Q9UHN1:0.015 |
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LYS | C:431 | C:431 | 59.0 | 0.295 | H | -62.0 | -45.3 | 59.0 | 0.295 | 0.0 | |||||||||||||
4ztu | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | LYS | B:407 | B:431 | 65.0 | 0.325 | H | -62.5 | -37.5 | 63.0 | 0.315 | 0.01 |
C:Q9UHN1:0.01 |
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LYS | C:407 | C:431 | 61.0 | 0.305 | H | -61.4 | -45.3 | 61.0 | 0.305 | 0.0 | |||||||||||||
4ztz | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | LYS | B:407 | B:431 | 64.0 | 0.32 | H | -62.5 | -37.5 | 62.0 | 0.31 | 0.01 |
C:Q9UHN1:0.01 |
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LYS | C:407 | C:431 | 61.0 | 0.305 | H | -61.4 | -45.3 | 61.0 | 0.305 | 0.0 | |||||||||||||
2g4c | 1 | Q9UHN1 | 99.14 | 0.0 |
X-RAY |
2006-04-18 | LYS | A:420 | A:431 | 60.0 | 0.3 | H | -57.2 | -60.4 | 60.0 | 0.3 | 0.0 |
HOH |
7.356 |
O |
O |
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LYS | B:420 | B:431 | 60.0 | 0.3 | H | -57.0 | -60.8 | NA | NA | NA | |||||||||||||
LYS | C:420 | C:431 | 74.0 | 0.37 | H | -73.2 | -37.6 | 74.0 | 0.37 | 0.0 | |||||||||||||
LYS | D:420 | D:431 | 74.0 | 0.37 | H | -73.1 | -37.0 | NA | NA | NA | |||||||||||||
5c53 | 2 | ? | 93.2 | 0.0 |
X-RAY |
2016-01-27 | LYS | B:398 | B:431 | 63.0 | 0.315 | H | -63.7 | -33.7 | 61.0 | 0.305 | 0.01 |
C:None:0.01 |
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LYS | C:398 | C:431 | 62.0 | 0.31 | H | -62.3 | -40.7 | 62.0 | 0.31 | 0.0 | |||||||||||||
5c53 | 2 | ? | 92.99 | 0.0 |
X-RAY |
2016-01-27 | LYS | B:849 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | C:849 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3ikl | 1 | Q9UHN1 | 93.2 | 0.0 |
X-RAY |
2010-08-25 | LYS | A:399 | A:431 | 54.0 | 0.27 | H | -120.6 | -48.6 | 54.0 | 0.27 | 0.0 | ||||||
LYS | B:399 | B:431 | 73.0 | 0.365 | H | -87.2 | -57.6 | 73.0 | 0.365 | 0.0 | |||||||||||||
3ikm | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | LYS | B:373 | B:431 | 26.0 | 0.13 | H | -72.1 | -30.0 | 22.0 | 0.11 | 0.02 |
C:Q9UHN1:0.02 |
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LYS | C:373 | C:431 | 61.0 | 0.305 | H | -53.0 | -62.4 | 61.0 | 0.305 | 0.0 | |||||||||||||
LYS | E:373 | E:431 | 35.0 | 0.175 | S | -81.9 | 170.3 | NA | NA | NA | |||||||||||||
LYS | F:373 | F:431 | 61.0 | 0.305 | H | -41.2 | -51.8 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9uhn1-f1 | 1 | Q9UHN1 | 100.0 | 0.0 | LYS | A:431 | A:431 | 35.0 | 0.175 | H | -61.7 | -46.8 |