Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 62476451 | . | C | A | CCDS32706.1:NM_007215.3:c.1247gGt>gTt_NP_009146.2:p.416G>V | Homo sapiens DNA polymerase gamma 2, accessory subunit (POLG2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c51 | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2016-05-11 | GLY | B:416 | B:416 | 5.0 | 0.067 | E | -103.4 | 61.6 | 5.0 | 0.067 | 0.0 | ||||||
GLY | C:416 | C:416 | 8.0 | 0.107 | -95.9 | 15.1 | 7.0 | 0.093 | 0.014 |
B:Q9UHN1:0.013 |
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5c52 | 2 | Q9UHN1 | 99.79 | 0.0 |
X-RAY |
2016-05-11 | GLY | B:416 | B:416 | 5.0 | 0.067 | E | -102.6 | 66.0 | 5.0 | 0.067 | 0.0 | ||||||
GLY | C:416 | C:416 | 6.0 | 0.08 | T | -93.5 | 13.9 | 6.0 | 0.08 | 0.0 | |||||||||||||
4ztu | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | GLY | B:392 | B:416 | 7.0 | 0.093 | -104.5 | 62.9 | 5.0 | 0.067 | 0.026 |
C:Q9UHN1:0.027 |
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GLY | C:392 | C:416 | 9.0 | 0.12 | -111.7 | 16.6 | 8.0 | 0.107 | 0.013 |
B:Q9UHN1:0.013 |
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4ztz | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | GLY | B:392 | B:416 | 7.0 | 0.093 | -104.4 | 62.9 | 7.0 | 0.093 | 0.0 | |||||||
GLY | C:392 | C:416 | 9.0 | 0.12 | -111.6 | 16.5 | 8.0 | 0.107 | 0.013 |
B:Q9UHN1:0.013 |
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2g4c | 1 | Q9UHN1 | 99.14 | 0.0 |
X-RAY |
2006-04-18 | GLY | A:405 | A:416 | 7.0 | 0.093 | -102.2 | -6.2 | 7.0 | 0.093 | 0.0 | |||||||
GLY | B:405 | B:416 | 8.0 | 0.107 | -101.8 | -5.5 | NA | NA | NA | ||||||||||||||
GLY | C:405 | C:416 | 1.0 | 0.013 | -86.2 | -19.6 | 1.0 | 0.013 | 0.0 | ||||||||||||||
GLY | D:405 | D:416 | 1.0 | 0.013 | -87.1 | -19.9 | NA | NA | NA | ||||||||||||||
5c53 | 2 | ? | 93.2 | 0.0 |
X-RAY |
2016-01-27 | GLY | B:383 | B:416 | 5.0 | 0.067 | E | -104.1 | 61.6 | 5.0 | 0.067 | 0.0 | ||||||
GLY | C:383 | C:416 | 8.0 | 0.107 | -101.2 | 16.3 | 7.0 | 0.093 | 0.014 |
B:None:0.013 |
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5c53 | 2 | ? | 92.99 | 0.0 |
X-RAY |
2016-01-27 | GLY | B:834 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLY | C:834 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3ikl | 1 | Q9UHN1 | 93.2 | 0.0 |
X-RAY |
2010-08-25 | GLY | A:384 | A:416 | 1.0 | 0.013 | G | -48.1 | -33.1 | 1.0 | 0.013 | 0.0 | ||||||
GLY | B:384 | B:416 | 0.0 | 0.0 | G | -52.1 | -68.2 | 0.0 | 0.0 | 0.0 | |||||||||||||
3ikm | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | GLY | B:358 | B:416 | 3.0 | 0.04 | -138.3 | 39.1 | 0.0 | 0.0 | 0.04 |
C:Q9UHN1:0.04 |
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GLY | C:358 | C:416 | 0.0 | 0.0 | H | -98.8 | 16.9 | 0.0 | 0.0 | 0.0 | |||||||||||||
GLY | E:358 | E:416 | 21.0 | 0.28 | -119.1 | 22.4 | NA | NA | NA | ||||||||||||||
GLY | F:358 | F:416 | 0.0 | 0.0 | H | -93.7 | 8.1 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9uhn1-f1 | 1 | Q9UHN1 | 100.0 | 0.0 | GLY | A:416 | A:416 | 5.0 | 0.067 | G | -61.2 | -26.3 |