Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 62479038 | . | G | A | CCDS32706.1:NM_007215.3:c.1189Cag>Tag_NP_009146.2:p.397Q>* | Homo sapiens DNA polymerase gamma 2, accessory subunit (POLG2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c51 | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2016-05-11 | GLN | B:397 | B:397 | 138.0 | 0.767 | T | -72.4 | -11.1 | 55.0 | 0.306 | 0.461 |
A:P54098:0.461 |
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GLN | C:397 | C:397 | 120.0 | 0.667 | H | -66.1 | -48.3 | 63.0 | 0.35 | 0.317 |
A:P54098:0.317 |
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5c52 | 2 | Q9UHN1 | 99.79 | 0.0 |
X-RAY |
2016-05-11 | GLN | B:397 | B:397 | 138.0 | 0.767 | H | -68.4 | -14.0 | 54.0 | 0.3 | 0.467 |
A:P54098:0.467 |
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GLN | C:397 | C:397 | 113.0 | 0.628 | H | -64.4 | -48.7 | 59.0 | 0.328 | 0.3 |
A:P54098:0.3 |
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4ztu | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | GLN | B:373 | B:397 | 140.0 | 0.778 | T | -77.2 | -4.6 | 56.0 | 0.311 | 0.467 |
A:P54098:0.467 |
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GLN | C:373 | C:397 | 124.0 | 0.689 | H | -64.6 | -51.9 | 70.0 | 0.389 | 0.3 |
A:P54098:0.3 |
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4ztz | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | GLN | B:373 | B:397 | 140.0 | 0.778 | T | -77.1 | -4.6 | 56.0 | 0.311 | 0.467 |
A:P54098:0.467 |
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GLN | C:373 | C:397 | 125.0 | 0.694 | H | -64.6 | -51.8 | 70.0 | 0.389 | 0.305 |
A:P54098:0.306 |
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2g4c | 1 | Q9UHN1 | 99.14 | 0.0 |
X-RAY |
2006-04-18 | GLN | A:386 | A:397 | 100.0 | 0.556 | G | -95.2 | -51.7 | 100.0 | 0.556 | 0.0 | ||||||
GLN | B:386 | B:397 | 100.0 | 0.556 | G | -95.6 | -51.7 | NA | NA | NA | |||||||||||||
GLN | C:386 | C:397 | 119.0 | 0.661 | H | -46.4 | -35.1 | 119.0 | 0.661 | 0.0 | |||||||||||||
GLN | D:386 | D:397 | 118.0 | 0.656 | H | -46.4 | -35.4 | NA | NA | NA | |||||||||||||
5c53 | 2 | ? | 93.2 | 0.0 |
X-RAY |
2016-01-27 | GLN | B:364 | B:397 | 141.0 | 0.783 | T | -76.6 | -9.9 | 58.0 | 0.322 | 0.461 |
A:P54098:0.461 |
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GLN | C:364 | C:397 | 119.0 | 0.661 | H | -65.8 | -49.7 | 68.0 | 0.378 | 0.283 |
A:P54098:0.283 |
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5c53 | 2 | ? | 92.99 | 0.0 |
X-RAY |
2016-01-27 | GLN | B:815 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
GLN | C:815 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3ikl | 1 | Q9UHN1 | 93.2 | 0.0 |
X-RAY |
2010-08-25 | GLN | A:365 | A:397 | 80.0 | 0.444 | H | -126.4 | -68.5 | 80.0 | 0.444 | 0.0 | ||||||
GLN | B:365 | B:397 | 126.0 | 0.7 | T | -100.9 | -29.3 | 126.0 | 0.7 | 0.0 | |||||||||||||
3ikm | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | GLN | B:339 | B:397 | 105.0 | 0.583 | H | -63.8 | -36.6 | 92.0 | 0.511 | 0.072 |
C:Q9UHN1:0.072 |
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GLN | C:339 | C:397 | 70.0 | 0.389 | T | -73.5 | 163.8 | 51.0 | 0.283 | 0.106 |
A:P54098:0.106 |
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GLN | E:339 | E:397 | 122.0 | 0.678 | S | -113.9 | -78.3 | NA | NA | NA | |||||||||||||
GLN | F:339 | F:397 | 78.0 | 0.433 | H | -56.2 | -35.5 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9uhn1-f1 | 1 | Q9UHN1 | 100.0 | 0.0 | GLN | A:397 | A:397 | 127.0 | 0.706 | H | -63.3 | -42.8 |