Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 62492690 | . | G | A | CCDS32706.1:NM_007215.3:c.397Cac>Tac_NP_009146.2:p.133H>Y | Homo sapiens DNA polymerase gamma 2, accessory subunit (POLG2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c51 | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2016-05-11 | HIS | B:133 | B:133 | 110.0 | 0.564 | S | -135.7 | -171.4 | 28.0 | 0.144 | 0.42 |
C:Q9UHN1:0.421 |
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HIS | C:133 | C:133 | 108.0 | 0.554 | S | -91.4 | 174.1 | 23.0 | 0.118 | 0.436 |
B:Q9UHN1:0.436 |
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5c52 | 2 | Q9UHN1 | 99.79 | 0.0 |
X-RAY |
2016-05-11 | HIS | B:133 | B:133 | 108.0 | 0.554 | S | -134.1 | -170.0 | 31.0 | 0.159 | 0.395 |
C:Q9UHN1:0.395 |
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HIS | C:133 | C:133 | 109.0 | 0.559 | S | -92.4 | 171.8 | 26.0 | 0.133 | 0.426 |
B:Q9UHN1:0.426 |
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4ztu | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | HIS | B:109 | B:133 | 111.0 | 0.569 | S | -138.2 | -171.9 | 32.0 | 0.164 | 0.405 |
C:Q9UHN1:0.405 |
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HIS | C:109 | C:133 | 110.0 | 0.564 | S | -87.5 | -178.4 | 25.0 | 0.128 | 0.436 |
B:Q9UHN1:0.436 |
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4ztz | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | HIS | B:109 | B:133 | 111.0 | 0.569 | S | -138.2 | -171.9 | 32.0 | 0.164 | 0.405 |
C:Q9UHN1:0.405 |
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HIS | C:109 | C:133 | 110.0 | 0.564 | S | -87.5 | -178.3 | 25.0 | 0.128 | 0.436 |
B:Q9UHN1:0.436 |
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2g4c | 1 | Q9UHN1 | 99.14 | 0.0 |
X-RAY |
2006-04-18 | HIS | A:122 | A:133 | 76.0 | 0.39 | E | -136.1 | 142.0 | 21.0 | 0.108 | 0.282 |
C:Q9UHN1:0.282 |
HOH |
9.234 |
ND1 |
O |
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HIS | B:122 | B:133 | 75.0 | 0.385 | E | -136.8 | 142.8 | NA | NA | NA | |||||||||||||
HIS | C:122 | C:133 | 72.0 | 0.369 | E | -137.9 | 131.9 | 7.0 | 0.036 | 0.333 |
A:Q9UHN1:0.333 |
HOH |
8.588 |
N |
O |
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HIS | D:122 | D:133 | 71.0 | 0.364 | E | -136.1 | 132.2 | NA | NA | NA | |||||||||||||
5c53 | 2 | ? | 93.2 | 0.0 |
X-RAY |
2016-01-27 | HIS | B:133 | B:133 | 112.0 | 0.574 | S | -132.9 | -171.9 | 31.0 | 0.159 | 0.415 |
C:None:0.415 |
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HIS | C:133 | C:133 | 110.0 | 0.564 | S | -88.9 | 174.2 | 26.0 | 0.133 | 0.431 |
B:None:0.431 |
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5c53 | 2 | ? | 92.99 | 0.0 |
X-RAY |
2016-01-27 | HIS | B:585 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
HIS | C:585 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3ikl | 1 | Q9UHN1 | 93.2 | 0.0 |
X-RAY |
2010-08-25 | HIS | A:133 | A:133 | 115.0 | 0.59 | B | -99.4 | 176.4 | 35.0 | 0.179 | 0.411 |
B:Q9UHN1:0.41 |
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HIS | B:133 | B:133 | 104.0 | 0.533 | -132.7 | 166.7 | 28.0 | 0.144 | 0.389 |
A:Q9UHN1:0.39 |
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3ikm | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | HIS | B:75 | B:133 | 108.0 | 0.554 | -116.9 | 173.1 | 37.0 | 0.19 | 0.364 |
C:Q9UHN1:0.364 |
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HIS | C:75 | C:133 | 114.0 | 0.585 | 41.9 | -129.0 | 57.0 | 0.292 | 0.293 |
B:Q9UHN1:0.292 |
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HIS | E:75 | E:133 | 123.0 | 0.631 | -116.4 | 165.2 | NA | NA | NA | ||||||||||||||
HIS | F:75 | F:133 | 118.0 | 0.605 | 40.4 | -132.6 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9uhn1-f1 | 1 | Q9UHN1 | 100.0 | 0.0 | HIS | A:133 | A:133 | 82.0 | 0.421 | E | -116.1 | 151.9 |