Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 62492726 | . | A | C | CCDS32706.1:NM_007215.3:c.361Ttc>Gtc_NP_009146.2:p.121F>V | Homo sapiens DNA polymerase gamma 2, accessory subunit (POLG2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c51 | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2016-05-11 | PHE | B:121 | B:121 | 124.0 | 0.59 | S | -60.9 | -37.8 | 67.0 | 0.319 | 0.271 |
C:Q9UHN1:0.271 |
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PHE | C:121 | C:121 | 17.0 | 0.081 | S | -77.7 | 125.4 | 16.0 | 0.076 | 0.005 |
B:Q9UHN1:0.005 |
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5c52 | 2 | Q9UHN1 | 99.79 | 0.0 |
X-RAY |
2016-05-11 | PHE | B:121 | B:121 | 122.0 | 0.581 | S | -55.5 | -43.3 | 69.0 | 0.329 | 0.252 |
C:Q9UHN1:0.252 |
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PHE | C:121 | C:121 | 20.0 | 0.095 | S | -78.9 | 124.2 | 18.0 | 0.086 | 0.009 |
B:Q9UHN1:0.01 |
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4ztu | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | PHE | B:97 | B:121 | 127.0 | 0.605 | S | -63.0 | -34.4 | 62.0 | 0.295 | 0.31 |
C:Q9UHN1:0.31 |
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PHE | C:97 | C:121 | 17.0 | 0.081 | S | -77.4 | 120.2 | 16.0 | 0.076 | 0.005 |
B:Q9UHN1:0.005 |
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4ztz | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | PHE | B:97 | B:121 | 127.0 | 0.605 | S | -63.1 | -34.4 | 62.0 | 0.295 | 0.31 |
C:Q9UHN1:0.31 |
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PHE | C:97 | C:121 | 17.0 | 0.081 | S | -77.4 | 120.2 | 16.0 | 0.076 | 0.005 |
B:Q9UHN1:0.005 |
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2g4c | 1 | Q9UHN1 | 99.14 | 0.0 |
X-RAY |
2006-04-18 | PHE | A:110 | A:121 | 139.0 | 0.662 | T | -13.5 | -102.6 | 118.0 | 0.562 | 0.1 |
C:Q9UHN1:0.1 |
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PHE | B:110 | B:121 | 136.0 | 0.648 | T | -13.4 | -102.3 | NA | NA | NA | |||||||||||||
PHE | C:110 | C:121 | 128.0 | 0.61 | S | -116.7 | -156.4 | 74.0 | 0.352 | 0.258 |
A:Q9UHN1:0.257 |
HOH |
8.956 |
CZ |
O |
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PHE | D:110 | D:121 | 131.0 | 0.624 | S | -117.1 | -156.8 | NA | NA | NA | |||||||||||||
5c53 | 2 | ? | 93.2 | 0.0 |
X-RAY |
2016-01-27 | PHE | B:121 | B:121 | 129.0 | 0.614 | S | -62.8 | -37.1 | 63.0 | 0.3 | 0.314 |
C:None:0.314 |
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PHE | C:121 | C:121 | 18.0 | 0.086 | S | -76.6 | 125.5 | 17.0 | 0.081 | 0.005 |
B:None:0.005 |
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5c53 | 2 | ? | 92.99 | 0.0 |
X-RAY |
2016-01-27 | PHE | B:573 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
PHE | C:573 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3ikl | 1 | Q9UHN1 | 93.2 | 0.0 |
X-RAY |
2010-08-25 | PHE | A:121 | A:121 | 140.0 | 0.667 | S | -33.2 | -82.8 | 84.0 | 0.4 | 0.267 |
B:Q9UHN1:0.267 |
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PHE | B:121 | B:121 | 132.0 | 0.629 | S | -51.2 | -178.5 | 71.0 | 0.338 | 0.291 |
A:Q9UHN1:0.29 |
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3ikm | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | PHE | B:63 | B:121 | 123.0 | 0.586 | T | -41.8 | -48.9 | 100.0 | 0.476 | 0.11 |
C:Q9UHN1:0.1 A:P54098:0.01 |
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PHE | C:63 | C:121 | 124.0 | 0.59 | S | -52.5 | 154.3 | 109.0 | 0.519 | 0.071 |
B:Q9UHN1:0.071 |
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PHE | E:63 | E:121 | 118.0 | 0.562 | S | -67.7 | -83.1 | NA | NA | NA | |||||||||||||
PHE | F:63 | F:121 | 129.0 | 0.614 | S | -45.3 | -74.4 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9uhn1-f1 | 1 | Q9UHN1 | 100.0 | 0.0 | PHE | A:121 | A:121 | 154.0 | 0.733 | T | -83.8 | 3.6 |