Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 62492763 | . | C | A | CCDS32706.1:NM_007215.3:c.324aaG>aaT_NP_009146.2:p.108K>N | Homo sapiens DNA polymerase gamma 2, accessory subunit (POLG2), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5c51 | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2016-05-11 | LYS | B:108 | B:108 | 118.0 | 0.59 | H | -60.8 | -51.8 | 59.0 | 0.295 | 0.295 |
C:Q9UHN1:0.295 |
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LYS | C:108 | C:108 | 115.0 | 0.575 | H | -71.9 | -42.0 | 92.0 | 0.46 | 0.115 |
B:Q9UHN1:0.115 |
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5c52 | 2 | Q9UHN1 | 99.79 | 0.0 |
X-RAY |
2016-05-11 | LYS | B:108 | B:108 | 121.0 | 0.605 | H | -61.0 | -50.3 | 60.0 | 0.3 | 0.305 |
C:Q9UHN1:0.305 |
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LYS | C:108 | C:108 | 112.0 | 0.56 | H | -72.6 | -40.8 | 89.0 | 0.445 | 0.115 |
B:Q9UHN1:0.115 |
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4ztu | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | LYS | B:84 | B:108 | 119.0 | 0.595 | H | -62.4 | -51.5 | 61.0 | 0.305 | 0.29 |
C:Q9UHN1:0.29 |
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LYS | C:84 | C:108 | 115.0 | 0.575 | H | -70.2 | -40.4 | 94.0 | 0.47 | 0.105 |
B:Q9UHN1:0.105 |
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4ztz | 2 | Q9UHN1 | 99.78 | 0.0 |
X-RAY |
2015-09-23 | LYS | B:84 | B:108 | 120.0 | 0.6 | H | -62.5 | -51.5 | 61.0 | 0.305 | 0.295 |
C:Q9UHN1:0.295 |
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LYS | C:84 | C:108 | 136.0 | 0.68 | H | -70.2 | -40.4 | 106.0 | 0.53 | 0.15 |
B:Q9UHN1:0.15 |
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2g4c | 1 | Q9UHN1 | 99.14 | 0.0 |
X-RAY |
2006-04-18 | LYS | A:97 | A:108 | 115.0 | 0.575 | H | -60.8 | -44.1 | 86.0 | 0.43 | 0.145 |
C:Q9UHN1:0.145 |
HOH |
3.282 |
NZ |
O |
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LYS | B:97 | B:108 | 119.0 | 0.595 | H | -62.1 | -43.3 | NA | NA | NA | |||||||||||||
LYS | C:97 | C:108 | 119.0 | 0.595 | H | -50.3 | -47.6 | 73.0 | 0.365 | 0.23 |
A:Q9UHN1:0.23 |
HOH |
5.097 |
CA |
O |
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LYS | D:97 | D:108 | 119.0 | 0.595 | H | -49.9 | -48.5 | NA | NA | NA | |||||||||||||
5c53 | 2 | ? | 93.2 | 0.0 |
X-RAY |
2016-01-27 | LYS | B:108 | B:108 | 120.0 | 0.6 | H | -61.3 | -51.5 | 61.0 | 0.305 | 0.295 |
C:None:0.295 |
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LYS | C:108 | C:108 | 115.0 | 0.575 | H | -68.1 | -42.3 | 94.0 | 0.47 | 0.105 |
B:None:0.105 |
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5c53 | 2 | ? | 92.99 | 0.0 |
X-RAY |
2016-01-27 | LYS | B:560 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
LYS | C:560 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
3ikl | 1 | Q9UHN1 | 93.2 | 0.0 |
X-RAY |
2010-08-25 | LYS | A:108 | A:108 | 122.0 | 0.61 | H | -54.8 | -46.4 | 91.0 | 0.455 | 0.155 |
B:Q9UHN1:0.155 |
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LYS | B:108 | B:108 | 126.0 | 0.63 | H | -60.9 | -40.5 | 89.0 | 0.445 | 0.185 |
A:Q9UHN1:0.185 |
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3ikm | 2 | Q9UHN1 | 100.0 | 0.0 |
X-RAY |
2009-11-03 | LYS | B:50 | B:108 | 153.0 | 0.765 | H | -53.9 | -34.4 | 81.0 | 0.405 | 0.36 |
C:Q9UHN1:0.36 |
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LYS | C:50 | C:108 | 111.0 | 0.555 | H | -67.4 | -54.1 | 64.0 | 0.32 | 0.235 |
B:Q9UHN1:0.235 |
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LYS | E:50 | E:108 | 136.0 | 0.68 | H | -57.2 | -56.6 | NA | NA | NA | |||||||||||||
LYS | F:50 | F:108 | 110.0 | 0.55 | H | -61.5 | -55.2 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9uhn1-f1 | 1 | Q9UHN1 | 100.0 | 0.0 | LYS | A:108 | A:108 | 92.0 | 0.46 | H | -63.0 | -43.1 |