Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 78111999 | . | T | A | CCDS11767.1:NM_014740.3:c.809gAc>gTc_NP_055555.1:p.270D>V | Homo sapiens eukaryotic translation initiation factor 4A3 (EIF4A3), mRNA. |
---|---|---|---|---|---|---|---|
|
|
|
|
PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2hyi | 4 | P38919 | 100.0 | 0.0 |
X-RAY |
2006-08-15 | ASP | E:270 | C:270 | 79.0 | 0.527 | H | -63.2 | -33.1 | 79.0 | 0.527 | 0.0 |
HOH |
7.552 |
O |
O |
||
ASP | I:270 | I:270 | 133.0 | 0.887 | H | -65.6 | -31.6 | NA | NA | NA | |||||||||||||
3ex7 | 3 | P38919 | 100.0 | 0.0 |
X-RAY |
2008-12-09 | ASP | C:270 | C:270 | 137.0 | 0.913 | H | -65.9 | -30.8 | 137.0 | 0.913 | 0.0 |
HOH |
2.724 |
O |
O |
||
ASP | G:270 | H:270 | 129.0 | 0.86 | H | -64.9 | -59.4 | NA | NA | NA | |||||||||||||
2xb2 | 1 | P38919 | 100.0 | 0.0 |
X-RAY |
2010-05-12 | ASP | A:270 | A:270 | 125.0 | 0.833 | H | -59.5 | -42.9 | NA | NA | NA | ||||||
ASP | K:270 | X:270 | 125.0 | 0.833 | H | -59.9 | -43.6 | 94.0 | 0.627 | 0.206 |
J:Q9BZI7:0.207 |
||||||||||||
4c9b | 1 | P38919 | 100.0 | 0.0 |
X-RAY |
2013-11-13 | ASP | A:270 | A:270 | 90.0 | 0.6 | H | -71.1 | -39.1 | 14.0 | 0.093 | 0.507 |
B:Q9HCG8:0.507 |
GOL HOH |
4.689 3.052 |
N OD2 |
H2 O |
|
5mqf | 30 | P38919 | 100.0 | 0.0 |
EM |
2017-03-22 | ASP | NA:270 | p:270 | NA | NA | NA | NA | NA | NA | NA | NA | ||||||
5xjc | 37 | P38919 | 100.0 | 0.0 |
EM |
2017-07-05 | ASP | UA:270 | u:270 | 75.0 | 0.5 | H | -63.2 | -33.1 | 75.0 | 0.5 | 0.0 | ||||||
5yzg | 29 | P38919 | 100.0 | 0.0 |
EM |
2018-08-08 | ASP | FA:270 | u:270 | 76.0 | 0.507 | H | -63.2 | -33.1 | 76.0 | 0.507 | 0.0 | ||||||
6icz | 3 | P38919 | 100.0 | 0.0 |
EM |
2019-03-13 | ASP | C:270 | u:270 | 82.0 | NA | H | -63.1 | -33.1 | 82.0 | NA | NA | ||||||
7a5p | 37 | P38919 | 100.0 | 0.0 |
EM |
2020-10-14 | ASP | UA:270 | y:270 | 53.0 | NA | H | -65.9 | -32.9 | 53.0 | NA | NA | ||||||
2j0q | 1 | P38919 | 100.0 | 0.0 |
X-RAY |
2006-08-30 | ASP | A:269 | A:270 | 128.0 | 0.853 | H | -52.1 | -47.6 | 128.0 | 0.853 | 0.0 | ||||||
ASP | B:269 | B:270 | 126.0 | 0.84 | H | -52.8 | -47.2 | NA | NA | NA | |||||||||||||
2j0s | 1 | P38919 | 100.0 | 0.0 |
X-RAY |
2006-09-06 | ASP | A:269 | A:270 | 129.0 | 0.86 | H | -65.0 | -33.9 | 129.0 | 0.86 | 0.0 |
HOH |
3.973 |
OD2 |
O |
||
6qdv | 4 | P38919 | 100.0 | 0.0 |
EM |
2019-02-20 | ASP | D:249 | 7:270 | 78.0 | 0.52 | H | -63.2 | -33.0 | 78.0 | 0.52 | 0.0 | ||||||
2hxy | 1 | P38919 | 100.0 | 0.0 |
X-RAY |
2006-08-15 | ASP | A:248 | A:270 | 138.0 | 0.92 | H | -40.4 | -38.7 | 138.0 | 0.92 | 0.0 | ||||||
ASP | B:248 | B:270 | 111.0 | 0.74 | H | -40.4 | -49.5 | NA | NA | NA | |||||||||||||
ASP | C:248 | C:270 | 125.0 | 0.833 | H | -40.6 | -45.2 | NA | NA | NA | |||||||||||||
ASP | D:248 | D:270 | 118.0 | 0.787 | H | -40.4 | -46.7 | NA | NA | NA | |||||||||||||
2j0u | 1 | P38919 | 98.93 | 0.0 |
X-RAY |
2006-09-06 | ASP | A:233 | A:270 | 118.0 | 0.787 | H | -52.4 | -50.1 | 118.0 | 0.787 | 0.0 | ||||||
2j0u | 2 | P38919 | 98.4 | 0.0 |
X-RAY |
2006-09-06 | ASP | B:233 | B:270 | 132.0 | 0.88 | H | -48.9 | -39.7 | NA | NA | NA | ||||||
6yvh | 3 | P38919 | 100.0 | 1e-121 |
X-RAY |
2020-05-13 | ASP | F:25 | H:270 | 94.0 | 0.627 | H | -58.6 | -38.8 | 11.0 | 0.073 | 0.554 |
A:Q9HCG8:0.553 |
|||||
ASP | G:25 | J:270 | 92.0 | 0.613 | H | -57.7 | -38.3 | 11.0 | 0.073 | 0.54 |
B:Q9HCG8:0.54 |
||||||||||||
ASP | H:25 | K:270 | 101.0 | 0.673 | H | -58.2 | -37.9 | 18.0 | 0.12 | 0.553 |
E:Q9HCG8:0.553 |
||||||||||||
ASP | I:25 | L:270 | 90.0 | 0.6 | H | -58.4 | -38.8 | 42.0 | 0.28 | 0.32 |
D:Q9HCG8:0.32 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p38919-f1 | 1 | P38919 | 100.0 | 0.0 | ASP | A:270 | A:270 | 128.0 | 0.853 | H | -62.6 | -35.9 |