Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79618124 . C A CCDS11783.1:NM_002602.3:c.244Gcc>Tcc_NP_002593.1:p.82A>S Homo sapiens phosphodiesterase 6G (PDE6G), transcript variant 1, mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6mzb 3 P04972 97.7 2e-59 EM
 2019-03-06 ALA C:82 C:82 61.0 0.53 H -61.1 -26.4 47.0 0.409 0.121 B:P11541:0.122
ALA D:82 D:82 40.0 0.348 T -70.4 -22.4 35.0 0.304 0.044 A:P23439:0.043
7jsn 4 P04972 97.7 2e-59 EM
 2020-10-21 ALA E:82 NA:NA DO NA DO DO DO NA NA NA
ALA F:82 NA:NA DO NA DO DO DO NA NA NA
2ju4 1 P04972 88.51 4e-54 NMR
 2007-10-16 ALA A:82 A:82 76.0 0.661 G -67.6 12.5 76.0 0.661 0.0 RCY
RCY
RCY
 3.224
1.287
2.821
 HB1
HB1
HB1
 C1Z
O1J
O1G
1fqj 3 P04972 100.0 3e-26 X-RAY
 2001-02-28 ALA C:37 C:82 61.0 0.53 H -73.5 -45.9 51.0 0.443 0.087 A:P04695+P10824:0.087
 HOH
 4.388
 CB
 O
3jab 4 P04972 100.0 7e-08 EM
 2015-06-10 ALA F:13 D:82 58.0 0.504 H -77.2 -35.3 39.0 0.339 0.165 E:None:0.165
 IBM
 9.819
 O
 C8
ALA H:13 P:82 59.0 0.513 H -77.2 -35.3 40.0 0.348 0.165 G:None:0.165
 IBM
 9.819
 O
 C8
3jbq 4 P04972 100.0 7e-08 EM
 2015-09-30 ALA D:13 D:82 77.0 0.67 T -90.5 7.6 36.0 0.313 0.357 C:None:0.357
ALA G:13 X:82 76.0 0.661 H -76.8 -16.1 50.0 0.435 0.226 F:None:0.226
3jwr 2 P18545 100.0 7e-08 X-RAY
 2009-10-13 ALA C:13 C:82 59.0 0.513 H -76.7 -35.2 43.0 0.374 0.139 A:O76074+P51160:0.139
ALA D:13 D:82 60.0 0.522 H -77.2 -35.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p18545-f1 1 P18545 100.0 2e-61 ALA A:82 A:82 60.0 0.522 H -65.8 -35.4
af-q13956-f1 1 Q13956 94.2 4e-45 ALA A:78 A:78 61.0 0.53 H -66.2 -36.4