Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79618130 . C A CCDS11783.1:NM_002602.3:c.238Gag>Tag_NP_002593.1:p.80E>* Homo sapiens phosphodiesterase 6G (PDE6G), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6mzb 3 P04972 97.7 2e-59 EM
 2019-03-06 GLU C:80 C:80 90.0 0.474 H -61.5 -44.4 67.0 0.353 0.121 B:P11541:0.121
GLU D:80 D:80 90.0 0.474 G -72.0 -32.3 63.0 0.332 0.142 A:P23439:0.142
7jsn 4 P04972 97.7 2e-59 EM
 2020-10-21 GLU E:80 C:80 111.0 NA 54.2 360.0 111.0 NA NA
GLU F:80 D:80 109.0 NA -74.8 360.0 109.0 NA NA
2ju4 1 P04972 88.51 4e-54 NMR
 2007-10-16 GLU A:80 A:80 126.0 0.663 -94.4 -17.3 126.0 0.663 0.0 RCY
RCY
RCY
 5.679
3.510
8.595
 HA
HA
O
 O1H
C1L
O1G
1fqj 3 P04972 100.0 3e-26 X-RAY
 2001-02-28 GLU C:35 C:80 45.0 0.237 H -78.7 -24.7 45.0 0.237 0.0 HOH
 2.651
 OE1
 O
3jab 4 P04972 100.0 7e-08 EM
 2015-06-10 GLU F:11 D:80 128.0 0.674 H -55.3 -45.0 93.0 0.489 0.185 E:None:0.184
 IBM
 9.999
 O
 C8
GLU H:11 P:80 127.0 0.668 H -55.3 -45.0 94.0 0.495 0.173 G:None:0.174
 IBM
 9.999
 O
 C8
3jbq 4 P04972 100.0 7e-08 EM
 2015-09-30 GLU D:11 D:80 82.0 0.432 H -66.9 -35.4 57.0 0.3 0.132 C:None:0.132
GLU G:11 X:80 106.0 0.558 H -77.1 -11.3 71.0 0.374 0.184 F:None:0.184
3jwr 2 P18545 100.0 7e-08 X-RAY
 2009-10-13 GLU C:11 C:80 127.0 0.668 H -55.5 -45.2 92.0 0.484 0.184 A:O76074+P51160:0.184
GLU D:11 D:80 129.0 0.679 H -55.3 -45.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p18545-f1 1 P18545 100.0 2e-61 GLU A:80 A:80 61.0 0.321 H -75.9 -35.8
af-q13956-f1 1 Q13956 94.2 4e-45 GLU A:76 A:76 64.0 0.337 H -71.3 -39.3