Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79620196 . A C CCDS11783.1:NM_002602.3:c.140gTt>gGt_NP_002593.1:p.47V>G Homo sapiens phosphodiesterase 6G (PDE6G), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6mzb 3 P04972 97.7 2e-59 EM
 2019-03-06 VAL C:47 NA:NA DO NA DO DO DO NA NA NA
VAL D:47 NA:NA DO NA DO DO DO NA NA NA
7jsn 4 P04972 97.7 2e-59 EM
 2020-10-21 VAL E:47 C:47 150.0 0.968 -74.2 153.4 98.0 0.632 0.336 B:P23439:0.168
A:P11541:0.174
VAL F:47 D:47 131.0 0.845 -104.8 146.2 81.0 0.523 0.322 B:P23439:0.232
A:P11541:0.097
2ju4 1 P04972 88.51 4e-54 NMR
 2007-10-16 VAL A:47 A:47 92.0 0.594 S -48.1 -58.1 92.0 0.594 0.0 RCY
RCY
RCY
 9.615
7.090
9.167
 O
O
O
 O1H
C1C
O1H
1fqj 3 P04972 100.0 3e-26 X-RAY
 2001-02-28 VAL C:2 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p18545-f1 1 P18545 100.0 2e-61 VAL A:47 A:47 89.0 0.574 -95.8 105.6
af-q13956-f1 1 Q13956 94.2 4e-45 VAL A:43 A:43 89.0 0.574 -79.4 97.2