Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79620219 . C A CCDS11783.1:NM_002602.3:c.117aaG>aaT_NP_002593.1:p.39K>N Homo sapiens phosphodiesterase 6G (PDE6G), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6mzb 3 P04972 97.7 2e-59 EM
 2019-03-06 LYS C:39 C:39 132.0 0.66 -84.4 67.4 51.0 0.255 0.405 B:P11541:0.275
A:P23439:0.16
LYS D:39 D:39 233.0 1.0 -171.0 360.0 175.0 0.875 0.125 B:P11541:0.275
A:P23439:0.04
7jsn 4 P04972 97.7 2e-59 EM
 2020-10-21 LYS E:39 C:39 192.0 0.96 -78.5 -54.8 58.0 0.29 0.67 B:P23439:0.485
C:P04695:0.2
LYS F:39 D:39 188.0 0.94 S -88.6 -2.8 50.0 0.25 0.69 A:P11541:0.555
D:P04695:0.17
2ju4 1 P04972 88.51 4e-54 NMR
 2007-10-16 LYS A:39 A:39 173.0 0.865 -152.8 140.4 173.0 0.865 0.0 RCY
RCY
RCY
 6.073
6.454
8.139
 H
H
H
 C1S
C1Z
O1J

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p18545-f1 1 P18545 100.0 2e-61 LYS A:39 A:39 215.0 1.0 -68.0 34.3
af-q13956-f1 1 Q13956 94.2 4e-45 LYS A:35 A:35 188.0 0.94 -79.9 48.1