Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79804328 . G A CCDS11787.1:NM_000918.3:c.1033Cgc>Tgc_NP_000909.2:p.345R>C Homo sapiens prolyl 4-hydroxylase subunit beta (P4HB), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6i7s 1 P07237 100.0 0.0 X-RAY
2019-08-21 ARG A:329 A:345 86.0 0.382 H -59.2 -35.1 86.0 0.382 0.0 EDO
6.656
O
O1
ARG B:329 B:345 89.0 0.396 H -58.7 -36.0 NA NA NA
4ekz 1 P07237 99.78 0.0 X-RAY
2013-04-10 ARG A:348 A:345 71.0 0.316 H -67.6 -23.8 71.0 0.316 0.0
4el1 1 P07237 99.78 0.0 X-RAY
2013-04-10 ARG A:348 A:345 60.0 0.267 H -59.6 -43.6 60.0 0.267 0.0
ARG B:348 B:345 87.0 0.387 H -55.2 -28.3 NA NA NA
3uem 1 P07237 98.85 0.0 X-RAY
2011-11-23 ARG A:227 A:345 86.0 0.382 H -69.9 -41.5 86.0 0.382 0.0 HOH
2.685
NH1
O
4ju5 1 P07237 100.0 9e-167 X-RAY
2014-02-19 ARG A:216 A:345 73.0 NA -112.2 35.9 65.0 NA NA B:P07237:NA
HOH
3.285
O
O
ARG B:216 B:345 94.0 NA H -61.6 -34.4 94.0 NA NA
3bj5 1 P07237 98.57 2e-95 X-RAY
2008-09-30 ARG A:124 A:328 60.0 0.267 H -52.6 -46.7 60.0 0.267 0.0 HOH
3.985
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07237-f1 1 P07237 100.0 0.0 ARG A:345 A:345 66.0 0.293 H -63.9 -35.3