Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79804369 . G A CCDS11787.1:NM_000918.3:c.992tCg>tTg_NP_000909.2:p.331S>L Homo sapiens prolyl 4-hydroxylase subunit beta (P4HB), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6i7s 1 P07237 100.0 0.0 X-RAY
2019-08-21 SER A:315 A:331 28.0 0.243 S -103.9 159.8 28.0 0.243 0.0 HOH
3.671
OG
O
SER B:315 B:331 17.0 0.148 S -100.6 157.6 NA NA NA
4ekz 1 P07237 99.78 0.0 X-RAY
2013-04-10 SER A:334 A:331 34.0 0.296 S -115.4 171.8 34.0 0.296 0.0 HOH
2.761
O
O
4el1 1 P07237 99.78 0.0 X-RAY
2013-04-10 SER A:334 A:331 43.0 0.374 S -70.5 166.3 43.0 0.374 0.0
SER B:334 B:331 33.0 0.287 -93.8 171.9 NA NA NA
3uem 1 P07237 98.85 0.0 X-RAY
2011-11-23 SER A:213 A:331 31.0 0.27 S -108.8 150.9 31.0 0.27 0.0 HOH
4.053
CB
O
4ju5 1 P07237 100.0 9e-167 X-RAY
2014-02-19 SER A:202 NA:NA DO NA DO DO DO NA NA NA
SER B:202 NA:NA DO NA DO DO DO NA NA NA
3bj5 1 P07237 98.57 2e-95 X-RAY
2008-09-30 SER A:110 A:314 33.0 0.287 -113.2 152.8 33.0 0.287 0.0 HOH
4.463
O
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07237-f1 1 P07237 100.0 0.0 SER A:331 A:331 30.0 0.261 -114.1 137.2