Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr17 | 79805210 | . | C | A | CCDS11787.1:NM_000918.3:c.638cGg>cTg_NP_000909.2:p.213R>L | Homo sapiens prolyl 4-hydroxylase subunit beta (P4HB), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6i7s | 1 | P07237 | 100.0 | 0.0 |
X-RAY |
2019-08-21 | ARG | A:197 | A:213 | 72.0 | 0.32 | E | -144.2 | 134.7 | 72.0 | 0.32 | 0.0 |
EDO |
5.970 |
N |
O1 |
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ARG | B:197 | B:213 | 74.0 | 0.329 | E | -147.4 | 134.4 | NA | NA | NA | |||||||||||||
4ekz | 1 | P07237 | 99.78 | 0.0 |
X-RAY |
2013-04-10 | ARG | A:216 | A:213 | 68.0 | 0.302 | E | -164.1 | 154.1 | 68.0 | 0.302 | 0.0 |
HOH |
2.343 |
NH1 |
O |
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4el1 | 1 | P07237 | 99.78 | 0.0 |
X-RAY |
2013-04-10 | ARG | A:216 | A:213 | 96.0 | 0.427 | E | -158.6 | 133.9 | 96.0 | 0.427 | 0.0 |
HOH |
8.993 |
N |
O |
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ARG | B:216 | B:213 | 103.0 | 0.458 | E | -162.2 | 127.8 | NA | NA | NA | |||||||||||||
3uem | 1 | P07237 | 98.85 | 0.0 |
X-RAY |
2011-11-23 | ARG | A:95 | A:213 | 64.0 | 0.284 | E | -169.5 | 138.3 | 64.0 | 0.284 | 0.0 |
HOH |
2.709 |
O |
O |
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4ju5 | 1 | P07237 | 100.0 | 9e-167 |
X-RAY |
2014-02-19 | ARG | A:84 | A:213 | 70.0 | 0.311 | E | -152.6 | 153.5 | 70.0 | 0.311 | 0.0 |
HOH |
6.891 |
N |
O |
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ARG | B:84 | B:213 | 69.0 | 0.307 | E | -166.9 | 155.2 | 69.0 | 0.307 | 0.0 |
HOH |
4.492 |
O |
O |
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2bjx | 1 | P07237 | 100.0 | 6e-70 |
NMR |
1999-02-09 | ARG | A:78 | A:196 | 129.0 | 0.573 | B | -134.9 | 161.6 | 129.0 | 0.573 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p07237-f1 | 1 | P07237 | 100.0 | 0.0 | ARG | A:213 | A:213 | 59.0 | 0.262 | E | -156.7 | 141.5 |