Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr17 79813385 . C A CCDS11787.1:NM_000918.3:c.430Gca>Tca_NP_000909.2:p.144A>S Homo sapiens prolyl 4-hydroxylase subunit beta (P4HB), mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6i7s 1 P07237 100.0 0.0 X-RAY
2019-08-21 ALA A:128 A:144 63.0 0.548 H -72.3 -38.4 63.0 0.548 0.0 HOH
6.686
O
O
ALA B:128 B:144 65.0 0.565 H -70.9 -40.2 NA NA NA
4ekz 1 P07237 99.78 0.0 X-RAY
2013-04-10 ALA A:147 A:144 67.0 0.583 H -53.5 -41.0 67.0 0.583 0.0 HOH
7.464
N
O
4el1 1 P07237 99.78 0.0 X-RAY
2013-04-10 ALA A:147 A:144 57.0 0.496 H -66.9 -57.4 57.0 0.496 0.0
ALA B:147 B:144 56.0 0.487 H -76.5 -42.6 NA NA NA
3uem 1 P07237 98.85 0.0 X-RAY
2011-11-23 ALA A:26 A:144 53.0 0.461 H -63.1 -42.8 53.0 0.461 0.0 HOH
2.686
O
O
4ju5 1 P07237 100.0 9e-167 X-RAY
2014-02-19 ALA A:15 A:144 62.0 0.539 H -69.1 -43.5 62.0 0.539 0.0 HOH
2.876
O
O
ALA B:15 B:144 68.0 0.591 H -64.5 -37.7 68.0 0.591 0.0 HOH
5.647
O
O
2bjx 1 P07237 100.0 6e-70 NMR
1999-02-09 ALA A:9 A:127 66.0 0.574 H -57.2 -29.7 66.0 0.574 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p07237-f1 1 P07237 100.0 0.0 ALA A:144 A:144 63.0 0.548 H -78.7 -39.8