Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr18 | 747947 | . | G | A | CCDS11824.1:NM_005433.3:c.443gCg>gTg_NP_005424.1:p.148A>V | Homo sapiens YES proto-oncogene 1, Src family tyrosine kinase (YES1), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 2h8h | 1 | P12931 | 82.24 | 0.0 |
X-RAY |
2006-11-21 | ALA | A:140 | A:138 | 5.0 | 0.043 | E | -144.9 | 160.0 | 5.0 | 0.043 | 0.0 |
HOH |
4.451 |
CA |
O |
||
| 2ptk | 1 | P00523 | 84.11 | 0.0 |
X-RAY |
1997-12-24 | ALA | A:58 | A:138 | 5.0 | 0.043 | E | -156.2 | 149.4 | 5.0 | 0.043 | 0.0 |
HOH |
4.089 |
CB |
O |
||
| 1fmk | 1 | P12931 | 84.26 | 0.0 |
X-RAY |
1997-08-20 | ALA | A:57 | A:138 | 3.0 | 0.026 | E | -139.0 | 152.1 | 3.0 | 0.026 | 0.0 |
HOH |
4.086 |
CA |
O |
||
| 1y57 | 1 | P12931 | 84.26 | 0.0 |
X-RAY |
2005-06-21 | ALA | A:57 | A:138 | 6.0 | 0.052 | E | -130.7 | 151.6 | 6.0 | 0.052 | 0.0 |
HOH |
4.584 |
CA |
O |
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| 2src | 1 | P12931 | 84.26 | 0.0 |
X-RAY |
1999-07-22 | ALA | A:57 | A:138 | 3.0 | 0.026 | E | -145.6 | 151.4 | 3.0 | 0.026 | 0.0 |
HOH |
4.904 |
CB |
O |
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| 1ksw | 1 | P12931 | 84.04 | 0.0 |
X-RAY |
2002-02-27 | ALA | A:57 | A:138 | 4.0 | 0.035 | E | -161.9 | 160.4 | 4.0 | 0.035 | 0.0 |
HOH |
4.623 |
CB |
O |
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| 6f3f | 1 | Q3UKD6 | 83.81 | 0.0 |
X-RAY |
2017-12-27 | ALA | A:60 | A:138 | 4.0 | 0.035 | E | -152.9 | 153.4 | 4.0 | 0.035 | 0.0 |
HOH |
5.731 |
HB2 |
O |
||
| 4k11 | 1 | P12931 | 83.93 | 0.0 |
X-RAY |
2014-04-09 | ALA | A:55 | A:138 | 3.0 | 0.026 | E | -139.4 | 157.6 | 3.0 | 0.026 | 0.0 |
HOH |
4.603 |
CB |
O |
||
| 3uf4 | 1 | P39688 | 80.75 | 3e-94 |
X-RAY |
2011-12-07 | ALA | A:59 | A:139 | 6.0 | 0.052 | E | -151.4 | 154.6 | 6.0 | 0.052 | 0.0 |
NA HOH |
7.488 4.109 |
CB CA |
NA O |
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| 5mtj | 1 | Q04736 | 98.26 | 6e-79 |
X-RAY |
2017-04-05 | SER | A:2 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 2hda | 1 | P07947 | 96.88 | 5e-37 |
X-RAY |
2007-04-17 | ALA | A:60 | A:148 | 30.0 | 0.261 | E | -133.5 | 154.3 | 30.0 | 0.261 | 0.0 |
HOH |
4.582 |
N |
O |
||
| 7a2v | 1 | P06241 | 81.67 | 9e-30 |
X-RAY |
2021-08-25 | ALA | A:57 | A:139 | 27.0 | 0.235 | E | -144.4 | 152.1 | 27.0 | 0.235 | 0.0 |
HOH |
3.468 |
HB3 |
O |
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| 7a2u | 1 | P06241 | 81.67 | 1e-29 |
X-RAY |
2021-08-25 | ALA | A:57 | A:139 | 29.0 | 0.252 | E | -145.1 | 155.0 | 29.0 | 0.252 | 0.0 |
HOH |
3.047 |
HA |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p07947-f1 | 1 | P07947 | 100.0 | 0.0 | ALA | A:148 | A:148 | 3.0 | 0.026 | E | -133.2 | 155.0 | |
| af-p12931-f1 | 1 | P12931 | 82.24 | 0.0 | ALA | A:141 | A:141 | 4.0 | 0.035 | E | -132.6 | 153.8 | |