Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr18 | 751793 | . | T | A | CCDS11824.1:NM_005433.3:c.283Ata>Tta_NP_005424.1:p.95I>L | Homo sapiens YES proto-oncogene 1, Src family tyrosine kinase (YES1), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
2h8h | 1 | P12931 | 82.24 | 0.0 |
X-RAY |
2006-11-21 | THR | A:87 | A:85 | 57.0 | 0.407 | 360.0 | 153.4 | 57.0 | 0.407 | 0.0 |
HOH |
6.245 |
O |
O |
|||
2ptk | 1 | P00523 | 84.11 | 0.0 |
X-RAY |
1997-12-24 | THR | A:5 | A:85 | 27.0 | 0.193 | E | -75.4 | 126.5 | 27.0 | 0.193 | 0.0 |
HOH |
3.411 |
O |
O |
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1fmk | 1 | P12931 | 84.26 | 0.0 |
X-RAY |
1997-08-20 | THR | A:4 | A:85 | 36.0 | 0.257 | E | -86.1 | 120.6 | 36.0 | 0.257 | 0.0 |
HOH |
2.754 |
OG1 |
O |
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1y57 | 1 | P12931 | 84.26 | 0.0 |
X-RAY |
2005-06-21 | THR | A:4 | A:85 | 5.0 | 0.036 | E | -95.1 | 129.4 | 5.0 | 0.036 | 0.0 |
HOH |
2.905 |
O |
O |
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2src | 1 | P12931 | 84.26 | 0.0 |
X-RAY |
1999-07-22 | THR | A:4 | A:85 | 20.0 | 0.143 | -84.1 | 158.8 | 20.0 | 0.143 | 0.0 |
HOH |
3.030 |
O |
O |
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1ksw | 1 | P12931 | 84.04 | 0.0 |
X-RAY |
2002-02-27 | THR | A:4 | A:85 | 21.0 | 0.15 | E | -76.6 | 155.5 | 21.0 | 0.15 | 0.0 |
HOH |
7.311 |
CG2 |
O |
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6f3f | 1 | Q3UKD6 | 83.81 | 0.0 |
X-RAY |
2017-12-27 | THR | A:7 | A:85 | 30.0 | 0.214 | E | -97.3 | 128.2 | 30.0 | 0.214 | 0.0 |
HOH |
8.552 |
HG21 |
O |
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4k11 | 1 | P12931 | 83.93 | 0.0 |
X-RAY |
2014-04-09 | THR | A:2 | A:85 | 21.0 | 0.15 | -81.9 | 150.7 | 21.0 | 0.15 | 0.0 |
HOH |
4.187 |
N |
O |
|||
3uf4 | 1 | P39688 | 80.75 | 3e-94 |
X-RAY |
2011-12-07 | LEU | A:6 | A:86 | 64.0 | 0.376 | -73.5 | 154.6 | 64.0 | 0.376 | 0.0 |
HOH |
4.592 |
CA |
O |
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2hda | 1 | P07947 | 96.88 | 5e-37 |
X-RAY |
2007-04-17 | ILE | A:7 | A:95 | 51.0 | 0.291 | E | -93.4 | 134.4 | 51.0 | 0.291 | 0.0 |
HOH |
2.873 |
N |
O |
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7a2v | 1 | P06241 | 81.67 | 9e-30 |
X-RAY |
2021-08-25 | LEU | A:4 | A:86 | 58.0 | 0.341 | E | -101.6 | 129.6 | 58.0 | 0.341 | 0.0 |
HOH |
2.960 |
HD23 |
O |
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7a2u | 1 | P06241 | 81.67 | 1e-29 |
X-RAY |
2021-08-25 | LEU | A:4 | A:86 | 53.0 | 0.312 | E | -101.9 | 123.6 | 53.0 | 0.312 | 0.0 |
HOH |
3.605 |
HD13 |
O |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p07947-f1 | 1 | P07947 | 100.0 | 0.0 | ILE | A:95 | A:95 | 54.0 | 0.309 | E | -90.4 | 131.8 | |
af-p12931-f1 | 1 | P12931 | 82.24 | 0.0 | THR | A:88 | A:88 | 35.0 | 0.25 | E | -92.2 | 133.4 |