Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 13737039 . A C CCDS11867.1:NM_003799.1:c.584aAa>aCa_NP_003790.1:p.195K>T Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e8j 1 O43148 100.0 0.0 X-RAY
 2016-07-13 LYS A:31 A:195 53.0 0.265 -90.2 -56.9 53.0 0.265 0.0 HOH
 6.681
 CB
 O
LYS B:31 B:195 41.0 0.205 -99.1 110.3 NA NA NA
5e9w 1 O43148 100.0 0.0 X-RAY
 2016-07-13 LYS A:31 A:195 92.0 NA T 66.9 35.4 92.0 NA NA HOH
 6.638
 N
 O
LYS B:31 B:195 207.0 1.0 T -88.8 10.3 NA NA NA
LYS C:31 C:195 49.0 0.245 -75.2 -62.4 NA NA NA
LYS D:31 D:195 55.0 0.275 -74.7 -65.7 NA NA NA
3bgv 1 O43148 100.0 0.0 X-RAY
 2007-12-04 LYS A:32 A:31 121.0 NA 80.9 360.0 121.0 NA NA HOH
 5.526
 O
 O
LYS B:32 B:31 189.0 0.945 -1.5 360.0 NA NA NA
LYS C:32 NA:NA DO NA DO DO DO NA NA NA
LYS D:32 NA:NA DO NA DO DO DO NA NA NA
3epp 1 O43148 100.0 0.0 X-RAY
 2008-10-21 LYS A:32 A:32 140.0 NA -16.2 360.0 140.0 NA NA HOH
 2.990
 C
 O
LYS B:32 B:32 94.0 NA T 73.0 21.5 NA NA NA
5e9j 1 O43148 87.42 0.0 X-RAY
 2016-07-13 LYS A:29 A:195 59.0 0.295 -74.5 -68.9 59.0 0.295 0.0
LYS B:29 B:195 38.0 0.19 -81.9 119.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43148-f1 1 O43148 100.0 0.0 LYS A:195 A:195 67.0 0.335 -120.6 116.1