Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 13740231 . A C CCDS11867.1:NM_003799.1:c.745Agt>Cgt_NP_003790.1:p.249S>R Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e8j 1 O43148 100.0 0.0 X-RAY
 2016-07-13 SER A:85 A:249 125.0 1.0 S -102.6 -13.3 125.0 1.0 0.0 HOH
 6.047
 N
 O
SER B:85 B:249 67.0 0.583 -94.5 -161.4 NA NA NA
5e9w 1 O43148 100.0 0.0 X-RAY
 2016-07-13 SER A:85 A:249 42.0 0.365 -74.9 118.4 42.0 0.365 0.0
SER B:85 B:249 36.0 0.313 -71.2 109.3 NA NA NA
SER C:85 C:249 46.0 0.4 -87.1 136.4 NA NA NA
SER D:85 D:249 42.0 0.365 -75.6 120.2 NA NA NA
3bgv 1 O43148 100.0 0.0 X-RAY
 2007-12-04 SER A:86 A:85 73.0 0.635 -132.5 360.0 73.0 0.635 0.0 HOH
 3.232
 N
 O
SER B:86 B:85 43.0 0.374 -53.5 131.2 NA NA NA
SER C:86 NA:NA DO NA DO DO DO NA NA NA
SER D:86 D:85 51.0 0.443 -43.3 360.0 NA NA NA
3epp 1 O43148 100.0 0.0 X-RAY
 2008-10-21 SER A:86 A:86 164.0 NA 360.0 -20.1 164.0 NA NA HOH
 3.136
 N
 O
SER B:86 NA:NA DO NA DO DO DO NA NA NA
5e9j 1 O43148 87.42 0.0 X-RAY
 2016-07-13 SER A:83 A:249 127.0 1.0 -82.0 -25.1 127.0 1.0 0.0
SER B:83 B:249 125.0 1.0 -82.0 -25.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43148-f1 1 O43148 100.0 0.0 SER A:249 A:249 131.0 1.0 -72.5 21.1