Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 13741579 . A C CCDS11867.1:NM_003799.1:c.863cAt>cCt_NP_003790.1:p.288H>P Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e8j 1 O43148 100.0 0.0 X-RAY
 2016-07-13 HIS A:124 A:288 1.0 0.005 G -70.7 -18.8 1.0 0.005 0.0 SAH
HOH
 6.432
3.275
 CE1
NE2
 C5'
O
HIS B:124 B:288 2.0 0.01 G -70.1 -18.6 NA NA NA
5e9w 1 O43148 100.0 0.0 X-RAY
 2016-07-13 HIS A:124 A:288 2.0 0.01 G -65.7 -22.8 2.0 0.01 0.0 SAH
HOH
 6.083
3.413
 NE2
CB
 C5'
O
HIS B:124 B:288 1.0 0.005 G -64.3 -22.5 NA NA NA
HIS C:124 C:288 2.0 0.01 G -66.3 -23.3 NA NA NA
HIS D:124 D:288 1.0 0.005 G -65.7 -23.1 NA NA NA
3bgv 1 O43148 100.0 0.0 X-RAY
 2007-12-04 HIS A:125 A:124 4.0 0.021 G -59.5 -17.7 4.0 0.021 0.0 HOH
 3.331
 CB
 O
HIS B:125 B:124 4.0 0.021 G -56.5 -27.2 NA NA NA
HIS C:125 C:124 2.0 0.01 G -60.9 -33.8 NA NA NA
HIS D:125 D:124 3.0 0.015 G -59.7 -23.0 NA NA NA
3epp 1 O43148 100.0 0.0 X-RAY
 2008-10-21 HIS A:125 A:125 4.0 0.021 G -55.3 -27.0 4.0 0.021 0.0 SFG
HOH
 5.395
4.730
 NE2
ND1
 NE
O
HIS B:125 B:125 4.0 0.021 G -58.3 -23.0 NA NA NA
5e9j 1 O43148 87.42 0.0 X-RAY
 2016-07-13 HIS A:122 A:288 0.0 0.0 G -62.1 -21.1 0.0 0.0 0.0 SAH
 5.915
 NE2
 C5'
HIS B:122 B:288 0.0 0.0 G -59.3 -20.8 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43148-f1 1 O43148 100.0 0.0 HIS A:288 A:288 1.0 0.005 G -64.9 -26.5