Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 13741666 . C A CCDS11867.1:NM_003799.1:c.950aCt>aAt_NP_003790.1:p.317T>N Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e8j 1 O43148 100.0 0.0 X-RAY
 2016-07-13 THR A:153 A:317 1.0 0.007 E -143.6 137.4 1.0 0.007 0.0 SAH
HOH
 6.245
2.777
 OG1
O
 OXT
O
THR B:153 B:317 2.0 0.014 E -143.5 138.2 NA NA NA
5e9w 1 O43148 100.0 0.0 X-RAY
 2016-07-13 THR A:153 A:317 1.0 0.007 E -140.1 131.8 1.0 0.007 0.0 SAH
HOH
 6.382
2.665
 OG1
O
 O
O
THR B:153 B:317 2.0 0.014 E -138.7 131.1 NA NA NA
THR C:153 C:317 0.0 0.0 E -140.3 132.1 NA NA NA
THR D:153 D:317 2.0 0.014 E -139.0 131.9 NA NA NA
3bgv 1 O43148 100.0 0.0 X-RAY
 2007-12-04 THR A:154 A:153 1.0 0.007 E -150.0 131.3 1.0 0.007 0.0 HOH
 2.784
 O
 O
THR B:154 B:153 1.0 0.007 E -142.9 135.9 NA NA NA
THR C:154 C:153 1.0 0.007 E -151.2 136.3 NA NA NA
THR D:154 D:153 0.0 0.0 E -146.2 130.2 NA NA NA
3epp 1 O43148 100.0 0.0 X-RAY
 2008-10-21 THR A:154 A:154 1.0 0.007 E -151.7 125.1 1.0 0.007 0.0 SFG
HOH
 6.070
2.945
 OG1
O
 O
O
THR B:154 B:154 0.0 0.0 E -138.9 135.7 NA NA NA
5e9j 1 O43148 87.42 0.0 X-RAY
 2016-07-13 THR A:151 A:317 0.0 0.0 E -139.9 131.3 0.0 0.0 0.0 SAH
 7.067
 OG1
 OXT
THR B:151 B:317 1.0 0.007 E -136.0 131.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43148-f1 1 O43148 100.0 0.0 THR A:317 A:317 0.0 0.0 E -129.3 139.0