Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 13746287 . T A CCDS11867.1:NM_003799.1:c.1208aTt>aAt_NP_003790.1:p.403I>N Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e8j 1 O43148 100.0 0.0 X-RAY
 2016-07-13 ILE A:239 A:403 30.0 0.171 T -73.9 -6.8 28.0 0.16 0.011 C:Q9BTL3:0.011
 HOH
 3.603
 CG2
 O
ILE B:239 B:403 33.0 0.189 T -71.4 -7.8 NA NA NA
5e9w 1 O43148 100.0 0.0 X-RAY
 2016-07-13 ILE A:239 A:403 27.0 0.154 T -84.7 3.1 27.0 0.154 0.0 HOH
 3.758
 CD1
 O
ILE B:239 B:403 28.0 0.16 T -83.9 2.1 NA NA NA
ILE C:239 C:403 25.0 0.143 T -83.1 1.4 NA NA NA
ILE D:239 D:403 35.0 0.2 T -84.2 1.8 NA NA NA
3bgv 1 O43148 100.0 0.0 X-RAY
 2007-12-04 ILE A:240 A:239 30.0 0.171 T -79.4 -15.7 30.0 0.171 0.0 HOH
 4.054
 CG2
 O
ILE B:240 B:239 30.0 0.171 T -74.1 -15.7 NA NA NA
ILE C:240 C:239 28.0 0.16 T -71.1 -18.5 NA NA NA
ILE D:240 D:239 24.0 0.137 H -74.3 -23.9 NA NA NA
3epp 1 O43148 100.0 0.0 X-RAY
 2008-10-21 ILE A:240 A:240 25.0 NA T -55.7 -28.1 25.0 NA NA HOH
 8.787
 N
 O
ILE B:240 B:240 20.0 0.114 T -68.2 -4.0 NA NA NA
5e9j 1 O43148 87.42 0.0 X-RAY
 2016-07-13 ILE A:237 A:403 27.0 0.154 T -75.8 -15.5 27.0 0.154 0.0
ILE B:237 B:403 25.0 0.143 T -78.6 -14.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43148-f1 1 O43148 100.0 0.0 ILE A:403 A:403 32.0 0.183 T -70.0 -17.2