Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 13746309 . G A CCDS11867.1:NM_003799.1:c.1230atG>atA_NP_003790.1:p.410M>I Homo sapiens RNA (guanine-7-) methyltransferase (RNMT), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5e8j 1 O43148 100.0 0.0 X-RAY
 2016-07-13 MET A:246 A:410 115.0 0.622 H -56.8 -39.6 115.0 0.622 0.0 HOH
 7.793
 N
 O
MET B:246 B:410 130.0 0.703 H -56.6 -39.9 NA NA NA
5e9w 1 O43148 100.0 0.0 X-RAY
 2016-07-13 MET A:246 A:410 106.0 0.573 H -85.0 -14.2 106.0 0.573 0.0 HOH
 9.463
 O
 O
MET B:246 B:410 93.0 0.503 H -81.9 -19.0 NA NA NA
MET C:246 C:410 78.0 0.422 H -82.4 -16.5 NA NA NA
MET D:246 D:410 86.0 0.465 H -83.5 -16.6 NA NA NA
3bgv 1 O43148 100.0 0.0 X-RAY
 2007-12-04 MET A:247 A:246 100.0 0.541 H -60.8 -42.9 100.0 0.541 0.0 HOH
 3.615
 SD
 O
MET B:247 B:246 107.0 0.578 H -56.7 -49.4 NA NA NA
MET C:247 C:246 97.0 0.524 H -62.5 -33.0 NA NA NA
MET D:247 D:246 116.0 0.627 H -57.6 -47.4 NA NA NA
3epp 1 O43148 100.0 0.0 X-RAY
 2008-10-21 MET A:247 A:247 57.0 0.308 H -63.7 -37.4 57.0 0.308 0.0
MET B:247 B:247 103.0 0.557 H -56.0 -34.8 NA NA NA
5e9j 1 O43148 87.42 0.0 X-RAY
 2016-07-13 MET A:244 A:410 120.0 0.649 H -66.5 -39.3 120.0 0.649 0.0
MET B:244 B:410 126.0 0.681 H -68.8 -36.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o43148-f1 1 O43148 100.0 0.0 MET A:410 A:410 109.0 0.589 H -68.9 -35.1