Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 45372110 . A C CCDS11934.1:NM_001003652.3:c.1059agT>agG_NP_001003652.1:p.353S>R Homo sapiens SMAD family member 2 (SMAD2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1khx 1 Q15796 100.0 1e-169 X-RAY
 2002-02-06 SER A:113 A:353 28.0 0.243 S -109.9 155.4 19.0 0.165 0.078 A:Q15796:0.078
 HOH
 2.796
 OG
 O
6zvq 1 Q15796 100.0 1e-169 X-RAY
 2021-06-09 SER A:113 A:353 30.0 0.261 S -103.7 156.5 18.0 0.157 0.104 A:Q15796:0.104
 HOH
 2.988
 OG
 O
6m64 1 Q15796 99.51 5e-152 X-RAY
 2020-11-25 SER A:94 A:353 29.0 0.252 S -104.8 147.2 27.0 0.235 0.017 C:Q15796:0.017
 HOH
 2.723
 OG
 O
SER C:94 C:353 26.0 0.226 S -114.1 154.8 26.0 0.226 0.0 HOH
 2.713
 OG
 O
SER E:94 E:353 27.0 0.235 S -104.6 156.1 1.0 0.009 0.226 A:Q15796:0.226
 HOH
 2.875
 OG
 O
7co1 1 Q15796 99.51 5e-152 X-RAY
 2020-11-25 SER A:94 A:353 26.0 0.226 S -124.5 142.7 26.0 0.226 0.0
SER C:94 C:353 30.0 0.261 S -124.9 143.3 30.0 0.261 0.0
SER E:94 E:353 34.0 0.296 S -123.8 142.8 34.0 0.296 0.0
1mk2 1 P84022 96.6 8e-150 X-RAY
 2002-10-16 SER A:92 A:310 24.0 0.209 S -109.6 135.3 24.0 0.209 0.0
1u7v 1 Q15796 100.0 2e-147 X-RAY
 2004-09-28 SER A:84 A:353 27.0 0.235 S -125.8 145.5 21.0 0.183 0.052 B:Q15796:0.052
SER B:84 C:353 28.0 0.243 S -117.0 154.0 19.0 0.165 0.078 C:Q13485:0.078
5xod 1 Q15796 100.0 2e-146 X-RAY
 2018-03-28 SER A:94 A:353 29.0 0.252 S -108.5 159.2 29.0 0.252 0.0 HOH
 3.379
 O
 O
5zoj 1 Q15796 100.0 3e-146 X-RAY
 2018-10-10 SER A:95 A:353 28.0 0.243 S -108.8 161.0 28.0 0.243 0.0
SER B:95 B:353 31.0 0.27 S -108.4 161.1 31.0 0.27 0.0
SER C:95 C:353 35.0 0.304 S -108.5 161.7 35.0 0.304 0.0
1dev 1 Q15796 100.0 7e-146 X-RAY
 2000-01-21 SER A:93 A:353 24.0 0.209 S -105.3 152.3 24.0 0.209 0.0
SER C:93 C:353 45.0 0.391 S -113.6 147.9 NA NA NA
1u7f 1 P84022 96.97 2e-144 X-RAY
 2004-09-28 SER A:84 A:311 26.0 0.226 S -139.9 150.6 8.0 0.07 0.156 C:P84022:0.157
 HOH
 3.291
 OG
 O
SER C:84 C:311 29.0 0.252 S -117.6 158.9 29.0 0.252 0.0 HOH
 3.501
 O
 O
1mjs 1 P84022 96.95 1e-143 X-RAY
 2002-10-16 SER A:83 A:310 19.0 0.165 S -112.2 148.7 19.0 0.165 0.0 HOH
 2.641
 OG
 O
5xoc 1 P84022 97.46 2e-143 X-RAY
 2018-03-28 SER A:94 A:311 32.0 0.278 S -109.8 159.9 32.0 0.278 0.0 HOH
 2.632
 OG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q15796-f1 1 Q15796 100.0 0.0 SER A:353 A:353 26.0 0.226 S -108.1 146.7
af-p84022-f1 1 P84022 83.94 0.0 SER A:311 A:311 27.0 0.235 S -108.6 143.8