Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr18 52544899 . G A CCDS11958.1:NM_004163.4:c.83aGa>aAa_NP_004154.2:p.28R>K Homo sapiens RAB27B, member RAS oncogene family (RAB27B), mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2iez 1 Q99P58 94.04 2e-156 X-RAY
 2007-05-01 ARG A:30 A:28 131.0 0.582 H -67.2 -33.8 131.0 0.582 0.0 GDP
 5.780
 NH2
 O2'
ARG B:30 B:28 113.0 0.502 H -64.2 -42.2 NA NA NA
ARG C:30 H:28 118.0 0.524 H -70.7 -27.7 NA NA NA
ARG D:30 I:28 110.0 0.489 H -55.1 -46.2 NA NA NA
2f7s 1 O00194 100.0 2e-149 X-RAY
 2005-12-20 ARG A:44 A:28 124.0 0.551 H -51.8 -39.6 124.0 0.551 0.0 GDP
 7.827
 CG
 O6
ARG B:44 B:28 111.0 0.493 H -56.5 -50.7 111.0 0.493 0.0 GDP
 7.445
 CB
 O6
2zet 1 Q99P58 95.02 1e-144 X-RAY
 2008-09-30 ARG A:30 A:28 43.0 0.191 H -66.9 -29.6 43.0 0.191 0.0 GTP
 7.503
 CB
 O6
ARG C:30 B:28 34.0 0.151 H -66.6 -53.5 NA NA NA
2if0 1 Q99P58 94.95 3e-142 X-RAY
 2007-05-01 ARG A:30 A:28 124.0 0.551 H -59.7 -44.4 124.0 0.551 0.0 GDP
 7.801
 CG
 O6
ARG B:30 B:28 106.0 0.471 H -57.2 -51.0 NA NA NA
2iey 1 Q99P58 95.34 2e-138 X-RAY
 2007-05-01 ARG A:30 A:28 116.0 0.516 H -69.2 -42.4 116.0 0.516 0.0 GDP
 8.145
 CB
 O6
ARG B:30 B:28 98.0 0.436 H -56.5 -48.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o00194-f1 1 O00194 100.0 4e-166 ARG A:28 A:28 39.0 0.173 H -63.9 -41.9