Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 12812955 . G A CCDS45991.1:NM_001136196.1:c.2342aCc>aTc_NP_001129668.1:p.781T>I Homo sapiens transportin 2 (TNPO2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 84.39 0.0 X-RAY
2007-10-30 THR A:774 A:774 1.0 0.007 H -62.8 -46.4 1.0 0.007 0.0
THR B:774 B:774 1.0 0.007 H -68.9 -46.5 NA NA NA
THR C:774 C:774 1.0 0.007 H -69.2 -46.3 NA NA NA
THR D:774 D:774 1.0 0.007 H -63.2 -47.1 NA NA NA
2z5j 1 Q92973 84.39 0.0 X-RAY
2007-10-23 THR A:774 A:774 2.0 0.014 H -54.8 -40.7 2.0 0.014 0.0
2z5k 1 Q92973 84.39 0.0 X-RAY
2007-10-23 THR A:774 A:774 0.0 0.0 H -66.7 -42.2 0.0 0.0 0.0
2z5m 1 Q92973 84.39 0.0 X-RAY
2007-10-23 THR A:774 A:774 0.0 0.0 H -69.6 -46.7 0.0 0.0 0.0
2z5n 1 Q92973 84.39 0.0 X-RAY
2007-10-23 THR A:774 A:774 1.0 0.007 H -46.7 -55.1 1.0 0.007 0.0
2z5o 1 Q92973 84.39 0.0 X-RAY
2007-10-23 THR A:774 A:774 1.0 0.007 H -66.4 -49.2 1.0 0.007 0.0
4fq3 1 Q92973 84.39 0.0 X-RAY
2013-08-21 THR A:774 A:774 1.0 0.007 H -64.6 -32.7 1.0 0.007 0.0
1qbk 1 Q92973 84.28 0.0 X-RAY
1999-06-01 THR A:774 B:774 1.0 0.007 H -61.1 -50.2 1.0 0.007 0.0
5yvg 1 Q92973 83.26 0.0 X-RAY
2018-05-16 THR A:752 A:774 0.0 0.0 H -62.8 -48.8 0.0 0.0 0.0
THR B:752 B:774 2.0 0.014 H -61.9 -49.0 NA NA NA
5yvh 1 Q92973 83.26 0.0 X-RAY
2018-05-16 THR A:752 A:774 2.0 0.014 H -62.9 -44.8 2.0 0.014 0.0
5yvi 1 Q92973 83.26 0.0 X-RAY
2018-05-16 THR A:752 A:774 1.0 0.007 H -73.9 -41.8 1.0 0.007 0.0
7cyl 1 Q92973 83.26 0.0 X-RAY
2021-02-24 THR A:752 A:774 1.0 0.007 H -62.6 -44.2 1.0 0.007 0.0
2h4m 1 Q92973 83.04 0.0 X-RAY
2006-10-24 THR A:749 A:774 2.0 0.014 H -70.1 -41.3 2.0 0.014 0.0
THR B:749 B:774 2.0 0.014 H -67.6 -50.5 2.0 0.014 0.0
5tqc 1 Q92973 82.92 0.0 X-RAY
2017-02-15 THR A:750 A:774 1.0 0.007 H -64.8 -47.0 1.0 0.007 0.0
2ot8 1 Q92973 82.25 0.0 X-RAY
2007-04-10 THR A:736 A:774 2.0 0.014 H -68.3 -45.7 2.0 0.014 0.0
THR B:736 B:774 0.0 0.0 H -72.1 -43.2 NA NA NA
4fdd 1 Q92973 82.25 0.0 X-RAY
2012-07-18 THR A:736 A:774 0.0 0.0 H -62.2 -44.7 0.0 0.0 0.0 HOH
3.530
CG2
O
4jlq 1 Q92973 81.81 0.0 X-RAY
2013-04-03 THR A:738 A:774 0.0 0.0 H -69.9 -45.9 0.0 0.0 0.0
4oo6 1 Q92973 81.81 0.0 X-RAY
2014-02-12 THR A:738 A:774 1.0 0.007 H -80.3 -49.2 1.0 0.007 0.0
5j3v 1 Q92973 81.81 0.0 X-RAY
2016-09-21 THR A:738 A:774 2.0 0.014 H -62.8 -45.8 2.0 0.014 0.0
THR C:738 B:774 1.0 0.007 H -63.5 -49.3 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14787-f1 1 O14787 100.0 0.0 THR A:781 A:781 0.0 0.0 H -64.1 -42.2
af-q92973-f1 1 Q92973 84.39 0.0 THR A:782 A:782 1.0 0.007 H -65.6 -42.0