Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 12816543 . A C CCDS45991.1:NM_001136196.1:c.1708Tgg>Ggg_NP_001129668.1:p.570W>G Homo sapiens transportin 2 (TNPO2), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2qmr 1 Q92973 84.39 0.0 X-RAY
 2007-10-30 TRP A:573 A:573 1.0 0.004 H -54.1 -27.3 1.0 0.004 0.0
TRP B:573 B:573 1.0 0.004 H -81.3 -53.8 NA NA NA
TRP C:573 C:573 7.0 0.027 H -56.7 -59.1 NA NA NA
TRP D:573 D:573 1.0 0.004 H -55.2 -49.6 NA NA NA
2z5j 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:573 A:573 14.0 0.055 H -61.2 -56.1 14.0 0.055 0.0
2z5k 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:573 A:573 22.0 0.086 H -53.9 -61.0 22.0 0.086 0.0 HOH
 5.273
 CD1
 O
2z5m 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:573 A:573 2.0 0.008 H -67.7 -31.2 2.0 0.008 0.0
2z5n 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:573 A:573 18.0 0.071 H -36.2 -45.8 18.0 0.071 0.0
2z5o 1 Q92973 84.39 0.0 X-RAY
 2007-10-23 TRP A:573 A:573 7.0 0.027 H -61.8 -40.2 7.0 0.027 0.0
4fq3 1 Q92973 84.39 0.0 X-RAY
 2013-08-21 TRP A:573 A:573 12.0 0.047 H -61.1 -54.5 12.0 0.047 0.0
1qbk 1 Q92973 84.28 0.0 X-RAY
 1999-06-01 TRP A:573 B:573 30.0 0.118 H -38.6 -46.7 30.0 0.118 0.0
5yvg 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 TRP A:551 A:573 19.0 0.075 H -66.3 -43.0 19.0 0.075 0.0
TRP B:551 B:573 47.0 0.184 H -64.1 -44.9 NA NA NA
5yvh 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 TRP A:551 A:573 11.0 0.043 H -56.3 -45.5 11.0 0.043 0.0
5yvi 1 Q92973 83.26 0.0 X-RAY
 2018-05-16 TRP A:551 A:573 11.0 0.043 H -71.0 -48.8 11.0 0.043 0.0
7cyl 1 Q92973 83.26 0.0 X-RAY
 2021-02-24 TRP A:551 A:573 12.0 0.047 H -55.7 -46.6 12.0 0.047 0.0
2h4m 1 Q92973 83.04 0.0 X-RAY
 2006-10-24 TRP A:548 A:573 17.0 0.067 H -59.1 -52.6 17.0 0.067 0.0
TRP B:548 B:573 20.0 0.078 H -56.5 -50.4 20.0 0.078 0.0
5tqc 1 Q92973 82.92 0.0 X-RAY
 2017-02-15 TRP A:549 A:573 5.0 0.02 H -73.1 -21.2 5.0 0.02 0.0
2ot8 1 Q92973 82.25 0.0 X-RAY
 2007-04-10 TRP A:535 A:573 13.0 0.051 H -64.0 -49.8 13.0 0.051 0.0
TRP B:535 B:573 20.0 0.078 H -58.3 -39.2 NA NA NA
4fdd 1 Q92973 82.25 0.0 X-RAY
 2012-07-18 TRP A:535 A:573 15.0 0.059 H -55.5 -45.7 15.0 0.059 0.0 HOH
 6.607
 N
 O
4jlq 1 Q92973 81.81 0.0 X-RAY
 2013-04-03 TRP A:537 A:573 2.0 0.008 H -55.0 -43.0 2.0 0.008 0.0
4oo6 1 Q92973 81.81 0.0 X-RAY
 2014-02-12 TRP A:537 A:573 4.0 0.016 H -44.3 -61.4 4.0 0.016 0.0
5j3v 1 Q92973 81.81 0.0 X-RAY
 2016-09-21 TRP A:537 A:573 20.0 0.078 H -60.8 -43.6 20.0 0.078 0.0
TRP C:537 B:573 18.0 0.071 H -62.2 -37.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o14787-f1 1 O14787 100.0 0.0 TRP A:570 A:570 6.0 0.024 H -52.9 -47.7
af-q92973-f1 1 Q92973 84.39 0.0 TRP A:581 A:581 14.0 0.055 H -50.4 -47.2