Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 41858612 . A C CCDS33031.1:NM_000660.4:c.338aTg>aGg_NP_000651.3:p.113M>R Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.
pdb_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ffo 3 P01137 99.17 0.0 X-RAY
 2017-01-25 MET C:86 C:84 18.0 0.097 -91.7 -173.2 18.0 0.097 0.0
MET D:86 D:84 12.0 0.065 -92.7 176.7 12.0 0.065 0.0
MET G:86 G:84 13.0 0.07 -94.7 179.4 13.0 0.07 0.0
MET H:86 H:84 11.0 0.059 -93.2 177.1 11.0 0.059 0.0
5vqp 1 P01137 99.17 0.0 X-RAY
 2017-11-15 MET A:86 A:84 3.0 0.016 -74.4 160.8 3.0 0.016 0.0
6uja 3 P07200 94.18 0.0 EM
 2020-02-05 MET C:86 D:84 20.0 NA -63.6 155.3 20.0 NA NA
3rjr 1 P07200 93.63 0.0 X-RAY
 2011-06-15 MET A:86 A:84 16.0 0.086 -80.6 -169.2 16.0 0.086 0.0
MET B:86 B:84 16.0 0.086 -80.6 -169.2 16.0 0.086 0.0
MET C:86 C:84 17.0 0.092 -80.6 -169.2 NA NA NA
MET D:86 D:84 16.0 0.086 -80.6 -169.2 NA NA NA
5vqf 1 P07200 93.63 0.0 X-RAY
 2017-11-15 MET A:86 A:84 3.0 0.016 -66.8 167.4 3.0 0.016 0.0
MET B:86 B:84 8.0 0.043 -67.8 167.3 8.0 0.043 0.0
MET C:86 C:84 4.0 0.022 -69.3 167.8 NA NA NA
MET D:86 D:84 6.0 0.032 -68.0 167.2 NA NA NA
6gff 1 P01137 100.0 0.0 X-RAY
 2018-11-07 MET A:84 NA:NA DO NA DO DO DO NA NA NA
MET C:84 C:113 42.0 0.227 -69.3 158.6 42.0 0.227 0.0
MET E:84 E:113 6.0 0.032 -69.9 157.3 NA NA NA
MET G:84 G:113 1.0 0.005 -70.0 157.4 NA NA NA
6p7j 1 P01137 100.0 0.0 X-RAY
 2020-03-11 MET A:84 A:83 13.0 0.07 E -82.0 97.4 13.0 0.07 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01137-f1 1 P01137 99.74 0.0 MET A:113 A:113 2.0 0.011 -63.8 155.0