Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr19 | 41858622 | . | G | A | CCDS33031.1:NM_000660.4:c.328Cgc>Tgc_NP_000651.3:p.110R>C | Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 5ffo | 3 | P01137 | 99.17 | 0.0 |
X-RAY |
2017-01-25 | ARG | C:83 | C:81 | 65.0 | 0.289 | E | -132.6 | 162.8 | 65.0 | 0.289 | 0.0 |
NAG |
8.145 |
NH2 |
C8 |
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| ARG | D:83 | D:81 | 73.0 | 0.324 | E | -129.5 | 161.7 | 73.0 | 0.324 | 0.0 |
NAG |
7.067 |
NH2 |
O7 |
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| ARG | G:83 | G:81 | 72.0 | 0.32 | E | -131.5 | 162.1 | 72.0 | 0.32 | 0.0 |
NAG |
8.989 |
NH1 |
C8 |
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| ARG | H:83 | H:81 | 73.0 | 0.324 | E | -128.9 | 161.8 | 73.0 | 0.324 | 0.0 |
NAG |
7.081 |
NH2 |
O7 |
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| 5vqp | 1 | P01137 | 99.17 | 0.0 |
X-RAY |
2017-11-15 | ARG | A:83 | A:81 | 69.0 | 0.307 | E | -121.9 | 144.8 | 69.0 | 0.307 | 0.0 |
NAG |
7.312 |
NH2 |
C8 |
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| 6uja | 3 | P07200 | 94.18 | 0.0 |
EM |
2020-02-05 | ARG | C:83 | D:81 | 73.0 | NA | E | -132.6 | 139.9 | 73.0 | NA | NA | ||||||
| 3rjr | 1 | P07200 | 93.63 | 0.0 |
X-RAY |
2011-06-15 | ARG | A:83 | A:81 | 66.0 | 0.293 | E | -133.2 | 141.6 | 66.0 | 0.293 | 0.0 |
NAG |
6.965 |
NH2 |
C8 |
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| ARG | B:83 | B:81 | 64.0 | 0.284 | E | -133.2 | 141.6 | 64.0 | 0.284 | 0.0 |
NAG |
7.269 |
NH2 |
O7 |
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| ARG | C:83 | C:81 | 65.0 | 0.289 | E | -133.2 | 141.7 | NA | NA | NA | |||||||||||||
| ARG | D:83 | D:81 | 65.0 | 0.289 | E | -133.3 | 141.6 | NA | NA | NA | |||||||||||||
| 5vqf | 1 | P07200 | 93.63 | 0.0 |
X-RAY |
2017-11-15 | ARG | A:83 | A:81 | 63.0 | 0.28 | E | -142.1 | 149.2 | 63.0 | 0.28 | 0.0 | ||||||
| ARG | B:83 | B:81 | 74.0 | 0.329 | E | -142.8 | 150.0 | 74.0 | 0.329 | 0.0 |
NAG |
7.600 |
NH2 |
O7 |
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| ARG | C:83 | C:81 | 55.0 | 0.244 | E | -142.8 | 152.2 | NA | NA | NA | |||||||||||||
| ARG | D:83 | D:81 | 62.0 | 0.276 | E | -141.4 | 149.3 | NA | NA | NA | |||||||||||||
| 6gff | 1 | P01137 | 100.0 | 0.0 |
X-RAY |
2018-11-07 | ARG | A:81 | A:110 | 57.0 | 0.253 | E | -127.9 | 140.0 | 57.0 | 0.253 | 0.0 | ||||||
| ARG | C:81 | C:110 | 77.0 | 0.342 | E | -134.5 | 146.1 | 77.0 | 0.342 | 0.0 | |||||||||||||
| ARG | E:81 | E:110 | 76.0 | 0.338 | E | -131.4 | 144.2 | NA | NA | NA | |||||||||||||
| ARG | G:81 | G:110 | 67.0 | 0.298 | E | -133.0 | 148.5 | NA | NA | NA | |||||||||||||
| 6p7j | 1 | P01137 | 100.0 | 0.0 |
X-RAY |
2020-03-11 | ARG | A:81 | A:80 | 173.0 | 0.769 | E | -88.3 | 150.3 | 173.0 | 0.769 | 0.0 | ||||||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
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| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p01137-f1 | 1 | P01137 | 99.74 | 0.0 | ARG | A:110 | A:110 | 111.0 | 0.493 | E | -103.6 | 114.4 | |