Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 41858829 . C A CCDS33031.1:NM_000660.4:c.121Gtg>Ttg_NP_000651.3:p.41V>L Homo sapiens transforming growth factor, beta 1 (TGFB1), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5ffo 3 P01137 99.17 0.0 X-RAY
 2017-01-25 VAL C:14 C:12 99.0 0.639 H -68.1 -38.5 54.0 0.348 0.291 D:P01137:0.29
VAL D:14 D:12 64.0 0.413 H -54.9 -35.0 18.0 0.116 0.297 C:P01137:0.297
VAL G:14 G:12 133.0 0.858 H -67.2 -39.8 79.0 0.51 0.348 H:P01137:0.348
VAL H:14 H:12 66.0 0.426 H -56.5 -35.8 21.0 0.135 0.291 G:P01137:0.29
5vqp 1 P01137 99.17 0.0 X-RAY
 2017-11-15 VAL A:14 A:12 66.0 0.426 H -64.8 -39.9 37.0 0.239 0.187 A:P01137:0.187
6uja 3 P07200 94.18 0.0 EM
 2020-02-05 VAL C:14 NA:NA DO NA DO DO DO NA NA NA
3rjr 1 P07200 93.63 0.0 X-RAY
 2011-06-15 VAL A:14 A:12 54.0 0.348 H -55.2 -55.4 36.0 0.232 0.116 B:P07200:0.116
VAL B:14 B:12 84.0 0.542 H -56.8 -49.6 47.0 0.303 0.239 A:P07200:0.239
VAL C:14 C:12 57.0 0.368 H -59.6 -47.9 NA NA NA
VAL D:14 D:12 77.0 0.497 H -57.2 -48.0 NA NA NA
5vqf 1 P07200 93.63 0.0 X-RAY
 2017-11-15 VAL A:14 A:12 76.0 0.49 H -65.1 -43.4 38.0 0.245 0.245 B:P07200:0.245
VAL B:14 B:12 73.0 0.471 H -66.1 -43.6 30.0 0.194 0.277 A:P07200:0.277
VAL C:14 C:12 91.0 0.587 H -67.2 -44.2 NA NA NA
VAL D:14 D:12 72.0 0.465 H -63.2 -43.5 NA NA NA
6gff 1 P01137 100.0 0.0 X-RAY
 2018-11-07 VAL A:12 A:41 55.0 0.355 H -65.4 -42.7 1.0 0.006 0.349 D:P01137:0.187
I:Q14392:0.239
VAL C:12 C:41 78.0 0.503 H -68.1 -41.0 16.0 0.103 0.4 B:P01137:0.277
D:P01137:0.129
 NAG
 8.570
 N
 C8
VAL E:12 E:41 55.0 0.355 H -65.6 -42.4 NA NA NA
VAL G:12 G:41 92.0 0.594 H -68.0 -41.5 NA NA NA
6p7j 1 P01137 100.0 0.0 X-RAY
 2020-03-11 VAL A:12 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p01137-f1 1 P01137 99.74 0.0 VAL A:41 A:41 46.0 0.297 H -62.6 -47.7