Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 42473010 . T A CCDS12594.1:NM_152296.4:c.2746Atc>Ttc_NP_689509.1:p.916I>F Homo sapiens ATPase Na+/K+ transporting subunit alpha 3 (ATP1A3), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3wgu 1 I7HD36 88.01 0.0 X-RAY
2013-10-09 ILE A:919 A:919 0.0 0.0 H -50.3 -41.4 0.0 0.0 0.0 NA
NA
8.493
6.732
CG2
CG2
NA
NA
ILE D:919 C:919 2.0 0.011 H -60.3 -40.3 NA NA NA
3wgv 1 I7HD36 88.01 0.0 X-RAY
2013-10-09 ILE A:919 A:919 0.0 0.0 H -62.7 -40.8 0.0 0.0 0.0 NA
NA
8.434
7.093
CG2
CG2
NA
NA
ILE D:919 C:919 1.0 0.006 H -73.8 -32.8 NA NA NA
4xe5 1 Q08DA1 87.61 0.0 X-RAY
2016-03-09 ILE A:924 A:924 1.0 0.006 H -58.0 -46.1 1.0 0.006 0.0 MG
HOH
8.618
8.212
CG2
CG2
MG
O
4hqj 1 P05024 87.51 0.0 X-RAY
2013-10-02 ILE A:924 A:919 2.0 0.011 H -63.9 -33.9 2.0 0.011 0.0 NA
NA
CLR
8.862
6.071
9.903
CG2
CG2
O
NA
NA
C27
ILE D:924 C:919 2.0 0.011 H -64.1 -34.0 NA NA NA
4hyt 1 P05024 87.51 0.0 X-RAY
2013-06-26 ILE A:924 A:919 1.0 0.006 H -53.0 -49.5 1.0 0.006 0.0 MG
HOH
8.613
8.341
CG2
CG2
MG
O
ILE D:924 C:919 1.0 0.006 H -53.1 -49.6 NA NA NA
4res 1 P05024 87.51 0.0 X-RAY
2015-01-28 ILE A:924 A:919 0.0 0.0 H -52.7 -44.7 0.0 0.0 0.0 K
8.500
CG2
K
ILE D:924 C:919 0.0 0.0 H -52.4 -45.3 NA NA NA
4ret 1 P05024 87.51 0.0 X-RAY
2015-01-28 ILE A:924 A:919 0.0 0.0 H -55.6 -46.4 0.0 0.0 0.0 MG
HOH
8.489
8.317
CG2
CG2
MG
O
ILE D:924 C:919 0.0 0.0 H -55.3 -46.7 NA NA NA
7evx 1 P05024 87.51 0.0 X-RAY
2021-07-07 ILE A:924 A:919 2.0 0.011 H -62.6 -45.0 2.0 0.011 0.0 MG
HOH
8.640
8.999
CG2
CG2
MG
O
ILE D:924 C:919 1.0 0.006 H -63.5 -43.9 NA NA NA
7d91 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 0.0 0.0 H -61.5 -42.3 0.0 0.0 0.0 MG
9.220
CG2
MG
7d92 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 0.0 0.0 H -61.3 -41.8 0.0 0.0 0.0 MG
HOH
8.834
8.504
CG2
CG2
MG
O
7d93 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 1.0 0.006 H -60.7 -47.5 1.0 0.006 0.0 MG
HOH
8.858
9.049
CG2
CG2
MG
O
ILE C:919 C:919 1.0 0.006 H -60.4 -45.6 NA NA NA
7d94 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 1.0 0.006 H -59.0 -47.4 1.0 0.006 0.0 RB
HOH
7.913
9.724
CG2
CG2
RB
O
ILE D:919 C:919 1.0 0.006 H -60.3 -45.5 NA NA NA
7ddf 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 0.0 0.0 H -62.3 -43.9 0.0 0.0 0.0 MG
HOH
8.818
8.929
CG2
CG2
MG
O
ILE D:919 C:919 1.0 0.006 H -63.5 -42.4 NA NA NA
7ddh 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 1.0 0.006 H -62.1 -40.2 1.0 0.006 0.0 MG
HOH
8.714
8.848
CD1
CD1
MG
O
ILE D:919 C:919 1.0 0.006 H -61.9 -38.5 NA NA NA
7ddi 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 1.0 0.006 H -62.6 -40.6 1.0 0.006 0.0 MG
HOH
9.012
9.155
CG2
CG2
MG
O
ILE D:919 C:919 1.0 0.006 H -62.8 -39.8 NA NA NA
7ddj 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 0.0 0.0 H -59.6 -46.9 0.0 0.0 0.0 MG
HOH
8.928
9.032
CG2
CG2
MG
O
ILE D:919 C:919 1.0 0.006 H -60.6 -45.6 NA NA NA
7ddk 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 1.0 0.006 H -59.9 -41.6 1.0 0.006 0.0 MG
HOH
8.888
8.922
CG2
CG2
MG
O
ILE D:919 C:919 1.0 0.006 H -60.4 -39.6 NA NA NA
7ddl 1 P05024 87.51 0.0 X-RAY
2021-01-27 ILE A:919 A:919 1.0 0.006 H -61.0 -44.7 1.0 0.006 0.0 MG
HOH
8.976
9.178
CG2
CG2
MG
O
ILE D:919 C:919 1.0 0.006 H -62.0 -42.3 NA NA NA
3b8e 1 P05024 87.58 0.0 X-RAY
2007-12-18 ILE A:901 A:919 5.0 0.029 H -67.7 -44.7 5.0 0.029 0.0 RB
RB
7.653
9.796
CD1
CG1
RB
RB
ILE D:901 C:919 3.0 0.017 H -52.1 -81.0 NA NA NA
3kdp 1 P05024 87.58 0.0 X-RAY
2010-02-16 ILE A:901 A:919 0.0 0.0 H -71.9 -47.8 0.0 0.0 0.0 RB
RB
7.446
9.988
CD1
CG1
RB
RB
ILE D:901 C:919 0.0 0.0 H -74.0 -47.3 NA NA NA
3n23 1 P05024 87.8 0.0 X-RAY
2011-01-19 ILE A:895 A:919 4.0 0.023 H -51.5 -57.9 4.0 0.023 0.0
ILE D:895 C:919 4.0 0.023 H -51.5 -58.3 NA NA NA
2zxe 1 Q4H132 85.56 0.0 X-RAY
2009-05-19 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 K
K
HOH
7.175
9.471
4.796
CG2
CG2
O
K
K
O
3a3y 1 Q4H132 85.56 0.0 X-RAY
2009-09-08 ILE A:931 A:926 1.0 0.006 H -50.8 -56.6 1.0 0.006 0.0 K
K
HOH
7.450
9.688
4.840
CG2
CG2
CG2
K
K
O
5avq 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 K
TL
K
TL
HOH
7.175
7.175
9.472
9.472
7.111
CG2
CG2
CG2
CG2
CG2
K
TL
K
TL
O
5avr 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.9 -46.5 1.0 0.006 0.0 K
TL
K
TL
HOH
7.175
7.175
9.471
9.471
7.112
CG2
CG2
CG2
CG2
CG2
K
TL
K
TL
O
5avs 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.6 1.0 0.006 0.0 K
TL
TL
HOH
7.175
7.175
9.471
7.112
CG2
CG2
CG2
CG2
K
TL
TL
O
5avt 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.4 1.0 0.006 0.0 K
TL
TL
HOH
7.174
7.174
9.471
7.112
CG2
CG2
CG2
CG2
K
TL
TL
O
5avu 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 K
TL
TL
HOH
7.175
7.175
9.470
7.112
CG2
CG2
CG2
CG2
K
TL
TL
O
5avv 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.5 1.0 0.006 0.0 TL
TL
HOH
7.175
9.472
7.112
CG2
CG2
CG2
TL
TL
O
5avw 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.6 1.0 0.006 0.0 TL
TL
HOH
7.175
9.471
7.113
CG2
CG2
CG2
TL
TL
O
5avx 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.9 -46.5 1.0 0.006 0.0 TL
TL
HOH
7.175
9.471
7.113
CG2
CG2
CG2
TL
TL
O
5avy 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 TL
TL
HOH
7.175
9.471
7.111
CG2
CG2
CG2
TL
TL
O
5avz 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.6 1.0 0.006 0.0 TL
TL
HOH
7.175
9.471
7.112
CG2
CG2
CG2
TL
TL
O
5aw0 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 TL
TL
HOH
7.177
9.473
7.113
CG2
CG2
CG2
TL
TL
O
5aw1 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 K
TL
TL
HOH
7.175
7.175
9.470
7.111
CG2
CG2
CG2
CG2
K
TL
TL
O
5aw2 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 TL
TL
HOH
7.175
9.472
7.112
CG2
CG2
CG2
TL
TL
O
5aw3 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.6 1.0 0.006 0.0 TL
TL
HOH
7.175
9.472
7.112
CG2
CG2
CG2
TL
TL
O
5aw4 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.6 1.0 0.006 0.0 K
RB
K
RB
HOH
7.176
7.176
9.471
9.471
7.114
CG2
CG2
CG2
CG2
CG2
K
RB
K
RB
O
5aw5 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 K
RB
K
RB
HOH
7.175
7.175
9.471
9.471
7.114
CG2
CG2
CG2
CG2
CG2
K
RB
K
RB
O
5aw6 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.9 -46.5 1.0 0.006 0.0 K
RB
K
RB
HOH
7.175
7.175
9.471
9.471
7.113
CG2
CG2
CG2
CG2
CG2
K
RB
K
RB
O
5aw7 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.7 -46.6 1.0 0.006 0.0 K
RB
RB
HOH
7.175
7.175
9.471
7.113
CG2
CG2
CG2
CG2
K
RB
RB
O
5aw8 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -56.8 -46.5 1.0 0.006 0.0 RB
RB
HOH
7.175
9.471
7.113
CG2
CG2
CG2
RB
RB
O
5aw9 1 Q4H132 85.56 0.0 X-RAY
2015-09-02 ILE A:931 A:926 1.0 0.006 H -57.9 -51.5 1.0 0.006 0.0 K
K
HOH
7.273
9.452
4.852
CG2
CG2
CG2
K
K
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p13637-f1 1 P13637 100.0 0.0 ILE A:916 A:916 0.0 0.0 H -61.1 -49.3
af-p50993-f1 1 P50993 88.81 0.0 ILE A:923 A:923 1.0 0.006 H -60.2 -48.7
af-p05023-f1 1 P05023 88.03 0.0 ILE A:926 A:926 1.0 0.006 H -62.1 -49.2