Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44156439 . T A CCDS33041.1:NM_001005376.2:c.692gAg>gTg_NP_001005376.1:p.231E>V Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 GLU A:209 A:209 96.0 0.505 G -105.0 -34.3 96.0 0.505 0.0 NAG
HOH
 6.077
7.058
 O
OE2
 C8
O
GLU C:209 C:209 84.0 0.442 S -108.5 -10.5 84.0 0.442 0.0 NAG
HOH
 7.719
7.580
 O
O
 O3
O
GLU E:209 E:209 94.0 0.495 T -109.6 -10.3 94.0 0.495 0.0 NAG
HOH
 7.394
4.451
 O
O
 O7
O
GLU G:209 G:209 116.0 0.611 T -98.9 -17.2 116.0 0.611 0.0 NAG
HOH
 5.991
3.496
 O
CD
 C8
O
GLU I:209 I:209 57.0 0.3 T -93.4 -11.8 57.0 0.3 0.0 NAG
HOH
 4.736
3.253
 OE1
OE2
 C8
O
GLU K:209 K:209 102.0 0.537 S -75.7 -43.2 102.0 0.537 0.0 NAG
HOH
 5.678
6.659
 O
OE2
 O7
O
GLU M:209 M:209 47.0 0.247 S -90.0 13.4 47.0 0.247 0.0 NAG
HOH
 5.440
3.037
 CG
OE2
 C8
O
GLU O:209 O:209 108.0 0.568 S -76.1 -15.6 108.0 0.568 0.0 NAG
 5.867
 O
 O7
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 GLU C:209 U:209 78.0 0.411 T -68.2 -19.9 78.0 0.411 0.0
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 GLU C:211 U:209 72.0 0.379 G -103.2 -6.6 72.0 0.379 0.0 NAG
 9.273
 OE2
 C8
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 GLU E:211 U:209 87.0 0.458 T -117.3 -2.6 87.0 0.458 0.0 NAG
 8.606
 OE2
 C1
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 GLU E:211 U:209 84.0 0.442 T -54.4 -28.2 84.0 0.442 0.0 NAG
 7.274
 OE1
 O6
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 GLU A:209 U:209 82.0 0.432 T -91.7 -13.5 82.0 0.432 0.0 NAG
NAG
 4.578
9.030
 O
OE2
 C8
C1
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 GLU A:209 U:209 85.0 0.447 G -93.0 -8.0 85.0 0.447 0.0 NAG
HOH
 8.618
6.586
 OE1
O
 O5
O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 GLU A:211 A:209 62.0 0.326 T -87.6 -17.6 62.0 0.326 0.0 NAG
 7.672
 OE1
 O7
GLU B:211 B:209 51.0 0.268 T -90.3 -0.7 51.0 0.268 0.0 NAG
 8.300
 OE2
 O6
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 GLU A:211 A:209 68.0 0.358 T -102.4 4.1 68.0 0.358 0.0
GLU B:211 B:209 66.0 0.347 S -97.3 2.6 66.0 0.347 0.0 NAG
 8.743
 OE2
 O6
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 GLU D:210 U:209 80.0 0.421 T -110.9 -29.3 80.0 0.421 0.0 NDG
HOH
 8.196
5.925
 OE2
N
 O1
O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 GLU E:211 E:209 86.0 0.453 T -142.0 -4.9 86.0 0.453 0.0
GLU F:211 F:209 85.0 0.447 T -143.5 -1.2 NA NA NA
GLU G:211 G:209 87.0 0.458 T 173.9 -2.3 NA NA NA
GLU H:211 H:209 87.0 0.458 T 173.4 1.1 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 GLU A:231 A:231 88.0 0.463 T -95.4 -9.5