Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 44159713 . T A CCDS33041.1:NM_001005376.2:c.485gAt>gTt_NP_001005376.1:p.162D>V Homo sapiens plasminogen activator, urokinase receptor (PLAUR), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
1ywh 1 Q9UMV0 99.68 0.0 X-RAY
 2005-05-10 ASP A:140 A:140 139.0 0.927 -96.9 75.4 112.0 0.747 0.18 C:Q9UMV0:0.18
 HOH
 5.453
 OD2
 O
ASP C:140 C:140 127.0 0.847 -73.6 44.8 26.0 0.173 0.674 D:None:0.007
E:Q9UMV0:0.667
 SO4
HOH
 9.467
3.575
 OD1
O
 O4
O
ASP E:140 E:140 137.0 0.913 -90.8 152.3 121.0 0.807 0.106 G:Q9UMV0:0.107
 SO4
HOH
 9.343
3.251
 O
CA
 O2
O
ASP G:140 G:140 109.0 0.727 -83.7 2.8 91.0 0.607 0.12 A:Q9UMV0:0.1
H:None:0.02
 SO4
HOH
 9.398
4.289
 O
CB
 O4
O
ASP I:140 I:140 144.0 0.96 -83.9 151.7 119.0 0.793 0.167 K:Q9UMV0:0.167
 NAG
SO4
HOH
 8.573
9.887
4.454
 OD1
O
O
 O7
O3
O
ASP K:140 K:140 137.0 0.913 -134.2 126.1 118.0 0.787 0.126 M:Q9UMV0:0.107
L:None:0.027
 HOH
 6.302
 C
 O
ASP M:140 M:140 186.0 1.0 360.0 125.1 159.0 1.0 0.0 O:Q9UMV0:0.18
 HOH
 2.926
 O
 O
ASP O:140 O:140 176.0 1.0 360.0 165.1 175.0 1.0 0.0 I:Q9UMV0:0.007
 HOH
 5.663
 CG
 O
4qti 3 Q03405 100.0 0.0 X-RAY
 2015-02-25 ASP C:140 NA:NA DO NA DO DO DO NA NA NA
3bt1 3 Q03405 100.0 0.0 X-RAY
 2008-03-25 ASP C:142 U:140 99.0 0.66 -62.6 135.4 23.0 0.153 0.507 A:P00749:0.507
3bt2 5 Q03405 100.0 0.0 X-RAY
 2008-03-25 ASP E:142 U:140 119.0 0.793 -63.5 142.7 33.0 0.22 0.573 A:P00749:0.573
4k24 5 Q03405 100.0 0.0 X-RAY
 2014-02-26 ASP E:142 U:140 115.0 0.767 S -66.1 137.8 19.0 0.127 0.64 A:P00749:0.64
3u73 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 ASP A:140 U:140 89.0 0.593 -51.7 132.0 15.0 0.1 0.493 B:P00749:0.493
3u74 1 Q03405 99.29 0.0 X-RAY
 2012-04-18 ASP A:140 U:140 202.0 1.0 360.0 56.0 202.0 1.0 0.0 HOH
 2.558
 OD2
 O
7e17 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 ASP A:142 NA:NA DO NA DO DO DO NA NA NA
ASP B:142 NA:NA DO NA DO DO DO NA NA NA
7v63 1 Q03405 100.0 0.0 X-RAY
 2021-12-22 ASP A:142 NA:NA DO NA DO DO DO NA NA NA
ASP B:142 NA:NA DO NA DO DO DO NA NA NA
2fd6 4 Q03405 100.0 0.0 X-RAY
 2006-02-21 ASP D:141 U:140 199.0 1.0 360.0 -49.5 111.0 0.74 0.26 A:P00749:0.587
 HOH
 2.395
 N
 O
2i9b 2 Q03405 98.56 0.0 X-RAY
 2007-01-02 ASP E:142 E:140 95.0 0.633 -69.2 161.2 15.0 0.1 0.533 A:P00749:0.533
 HOH
 6.393
 OD1
 O
ASP F:142 F:140 94.0 0.627 -68.7 160.8 NA NA NA
ASP G:142 G:140 96.0 0.64 -64.8 136.3 NA NA NA
ASP H:142 H:140 94.0 0.627 -63.3 135.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q03405-f1 1 Q03405 100.0 0.0 ASP A:162 A:162 105.0 0.7 -65.9 140.7