Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 50028004 . G A CCDS12770.1:NM_001136019.2:c.842gGg>gAg_NP_001129491.1:p.281G>E Homo sapiens Fc fragment of IgG receptor and transporter (FCGRT), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6fgb 1 P55899 100.0 0.0 X-RAY
 2018-08-29 GLY A:258 A:258 25.0 0.333 T -81.8 -7.8 25.0 0.333 0.0 HOH
 7.148
 N
 O
5whk 3 P55899 100.0 0.0 X-RAY
 2017-09-06 GLY C:281 A:258 26.0 0.347 T -78.4 -10.6 26.0 0.347 0.0 HOH
 4.565
 O
 O
5bxf 1 P55899 100.0 0.0 X-RAY
 2015-11-11 GLY A:281 A:258 25.0 0.333 T -85.4 5.6 25.0 0.333 0.0
GLY C:281 C:258 23.0 0.307 T -61.3 -18.6 NA NA NA
4k71 2 P55899 100.0 0.0 X-RAY
 2013-10-23 GLY B:258 B:258 26.0 0.347 T -86.7 -10.8 26.0 0.347 0.0 HOH
 5.167
 N
 O
GLY E:258 E:258 25.0 0.333 T -77.5 -11.8 NA NA NA
6c97 1 P55899 100.0 0.0 X-RAY
 2018-05-30 GLY A:258 A:258 26.0 0.347 T -75.5 -8.0 26.0 0.347 0.0 HOH
 5.131
 N
 O
GLY C:258 C:258 28.0 0.373 T -76.4 -12.4 NA NA NA
6c98 1 P55899 100.0 0.0 X-RAY
 2018-05-30 GLY A:258 A:258 27.0 0.36 T -75.5 -11.4 27.0 0.36 0.0 HOH
 4.887
 N
 O
GLY C:258 C:258 28.0 0.373 T -75.4 -8.2 NA NA NA
6c99 1 P55899 100.0 0.0 X-RAY
 2018-05-30 GLY A:258 A:258 27.0 0.36 T -72.6 -8.8 27.0 0.36 0.0 HOH
 5.141
 N
 O
GLY C:258 C:258 28.0 0.373 T -76.5 -6.7 NA NA NA
6qio 2 P55899 100.0 0.0 X-RAY
 2020-02-05 GLY B:258 B:258 26.0 0.347 T -80.4 -0.9 26.0 0.347 0.0 HOH
 2.848
 O
 O
6qip 2 P55899 100.0 0.0 X-RAY
 2020-02-05 GLY B:258 B:258 22.0 0.293 T -79.1 -0.9 22.0 0.293 0.0
6nha 1 P55899 98.2 0.0 X-RAY
 2019-12-25 GLY A:258 A:258 22.0 0.293 T -85.2 9.8 22.0 0.293 0.0 NHE
HOH
 5.092
4.100
 N
O
 C2'
O
4n0f 1 P55899 100.0 0.0 X-RAY
 2014-02-05 GLY A:255 A:258 23.0 0.307 T -86.0 13.9 23.0 0.307 0.0
GLY D:255 E:258 23.0 0.307 T -85.4 13.3 NA NA NA
GLY G:255 H:258 23.0 0.307 T -85.4 13.8 NA NA NA
GLY J:255 K:258 23.0 0.307 T -85.0 13.5 NA NA NA
1exu 1 P55899 100.0 0.0 X-RAY
 2000-08-10 GLY A:258 A:258 24.0 0.32 T -89.2 9.1 24.0 0.32 0.0 HOH
 3.914
 O
 O
3m17 1 P55899 100.0 0.0 X-RAY
 2010-06-16 GLY A:258 A:258 27.0 0.36 T -73.6 -26.1 27.0 0.36 0.0
GLY C:258 C:258 25.0 0.333 T -80.4 -15.1 NA NA NA
GLY E:258 E:258 28.0 0.373 T -76.7 -14.7 NA NA NA
GLY G:258 G:258 27.0 0.36 T -67.8 -16.0 NA NA NA
3m1b 1 P55899 100.0 0.0 X-RAY
 2010-06-16 GLY A:258 A:258 27.0 0.36 T -59.4 -23.3 27.0 0.36 0.0
GLY C:258 C:258 30.0 0.4 T -124.6 -3.9 NA NA NA
GLY E:258 E:258 23.0 0.307 T -89.6 -5.3 NA NA NA
GLY G:258 G:258 34.0 0.453 T -77.3 -19.4 NA NA NA
5bjt 1 P55899 100.0 0.0 X-RAY
 2017-03-22 GLY A:258 A:258 29.0 0.387 T -70.1 -1.7 29.0 0.387 0.0
GLY C:258 C:258 27.0 0.36 T -107.6 8.2 NA NA NA
GLY E:258 E:258 27.0 0.36 T -76.7 13.3 NA NA NA
GLY G:258 G:258 46.0 0.613 S -116.8 -140.4 NA NA NA
6wol 2 P55899 100.0 0.0 X-RAY
 2021-09-15 GLY B:258 A:258 22.0 0.293 T -67.8 -18.2 22.0 0.293 0.0 HOH
 6.776
 N
 O
7b5f 5 P55899 100.0 0.0 EM
 2022-01-12 GLY E:258 NA:NA DO NA DO DO DO NA NA NA
4n0u 1 P55899 100.0 0.0 X-RAY
 2014-02-05 GLY A:255 A:258 23.0 0.307 T -86.1 11.8 23.0 0.307 0.0
6wna 1 P55899 100.0 0.0 X-RAY
 2021-09-15 GLY A:255 A:258 26.0 0.347 T -68.1 -21.3 26.0 0.347 0.0 HOH
 5.086
 N
 O
6ilm 5 P55899 100.0 0.0 EM
 2019-05-15 GLY E:254 E:258 13.0 0.173 T -82.5 0.6 13.0 0.173 0.0
6la6 5 P55899 100.0 0.0 EM
 2020-10-07 GLY E:254 E:258 12.0 0.16 T -76.9 2.2 12.0 0.16 0.0
6la7 5 P55899 100.0 0.0 EM
 2020-10-07 GLY E:254 E:258 21.0 0.28 T -85.1 -17.1 21.0 0.28 0.0
7c9v 5 P55899 100.0 0.0 EM
 2020-07-29 GLY E:254 E:258 18.0 0.24 S -103.5 15.7 18.0 0.24 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p55899-f1 1 P55899 100.0 0.0 GLY A:281 A:281 25.0 0.333 T -78.7 -8.7