Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783461 . C A CCDS12886.1:NM_005874.3:c.397Gtg>Ttg_NP_005865.2:p.133V>L Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 VAL A:110 A:111 14.0 0.09 S -135.0 119.0 14.0 0.09 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 VAL B:142 B:111 27.0 0.174 E -91.4 111.5 27.0 0.174 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 VAL G:110 G:111 35.0 0.226 -118.9 101.2 35.0 0.226 0.0
VAL H:110 H:111 28.0 0.181 -113.0 97.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 VAL A:111 A:111 74.0 0.477 B -99.5 121.5 74.0 0.477 0.0 HOH
 4.092
 O
 O
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 VAL A:110 A:111 75.0 0.484 B -95.1 116.1 75.0 0.484 0.0 HOH
 3.347
 O
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 VAL D:110 D:110 72.0 0.465 B -102.6 124.8 72.0 0.465 0.0 HOH
 9.535
 CA
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 VAL A:111 A:111 87.0 0.561 E -107.9 110.7 87.0 0.561 0.0 HOH
 2.596
 O
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 VAL C:111 D:111 61.0 0.394 E -99.1 124.0 61.0 0.394 0.0 HOH
 6.759
 N
 O
VAL F:111 H:111 68.0 0.439 E -93.0 116.3 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 VAL D:112 NA:NA DO NA DO DO DO NA NA NA
VAL H:112 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 VAL A:110 A:111 68.0 0.439 E -88.3 112.2 68.0 0.439 0.0 HOH
 3.380
 O
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 VAL D:110 D:111 52.0 0.335 E -105.4 110.7 52.0 0.335 0.0
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 VAL A:110 A:111 96.0 0.619 -92.9 109.3 96.0 0.619 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 VAL D:108 D:111 68.0 0.439 E -101.7 124.3 68.0 0.439 0.0 HOH
 3.838
 O
 O
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 VAL D:108 D:111 71.0 0.458 E -94.5 127.8 71.0 0.458 0.0
VAL H:108 H:111 69.0 0.445 E -90.7 119.7 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 VAL D:108 D:111 75.0 0.484 E -86.8 132.4 75.0 0.484 0.0
VAL H:108 H:111 74.0 0.477 E -87.1 134.3 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 VAL D:108 D:111 65.0 0.419 E -90.8 113.0 65.0 0.419 0.0 HOH
 3.260
 O
 O
VAL H:108 H:111 66.0 0.426 E -94.8 120.5 NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 VAL A:111 A:111 64.0 0.413 E -84.7 115.7 64.0 0.413 0.0 HOH
 3.797
 O
 O
VAL B:111 B:111 60.0 0.387 E -108.2 108.0 60.0 0.387 0.0 HOH
 7.690
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 VAL A:133 A:133 25.0 0.161 B -88.1 121.1
af-o75019-f1 1 O75019 84.62 0.0 VAL A:134 A:134 21.0 0.135 E -89.4 120.6
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 VAL A:134 A:134 36.0 0.232 B -88.9 120.5