Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr19 54783693 . C A CCDS12886.1:NM_005874.3:c.308cGc>cTc_NP_005865.2:p.103R>L Homo sapiens leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2 (LILRB2), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6aed 1 Q8N423 99.24 0.0 X-RAY
 2019-07-31 ARG A:80 A:80 136.0 0.604 T 57.1 51.0 136.0 0.604 0.0
6zdx 2 A0A0G2JQ46 80.15 0.0 X-RAY
 2020-07-22 THR B:112 B:81 137.0 0.979 S -57.2 -35.6 137.0 0.979 0.0
6aee 4 A0A0G2JQ44 80.61 0.0 X-RAY
 2019-07-31 THR G:80 G:81 97.0 0.693 S -161.6 122.8 97.0 0.693 0.0
THR H:80 H:81 134.0 0.957 S -148.0 96.0 NA NA NA
6bcs 1 A0A0G2JNQ7 99.49 3e-141 X-RAY
 2018-09-05 ARG A:81 A:80 73.0 NA T 56.6 43.8 73.0 NA NA
2gw5 1 Q8N423 99.49 5e-141 X-RAY
 2006-06-20 ARG A:80 A:80 214.0 0.951 T 51.7 46.5 214.0 0.951 0.0 HOH
 2.958
 O
 O
2dyp 4 Q8N423 98.98 3e-139 X-RAY
 2006-11-07 ARG D:80 D:80 158.0 0.702 T 46.9 48.8 158.0 0.702 0.0 HOH
 3.249
 N
 O
1ugn 1 Q8NHL6 81.31 7e-105 X-RAY
 2004-08-10 THR A:81 A:81 142.0 1.0 T -60.0 -51.2 142.0 1.0 0.0 HOH
 2.872
 OG1
 O
3d2u 3 Q8NHL6 80.81 3e-104 X-RAY
 2008-07-08 THR C:81 D:81 137.0 0.979 S -39.1 -19.9 137.0 0.979 0.0 HOH
 4.609
 N
 O
THR F:81 H:81 142.0 1.0 T -59.7 -48.4 NA NA NA
6k60 4 A0A0G2JQ44 81.12 6e-104 X-RAY
 2019-11-27 THR D:82 NA:NA DO NA DO DO DO NA NA NA
THR H:82 NA:NA DO NA DO DO DO NA NA NA
1g0x 1 Q8NHL6 81.12 1e-103 X-RAY
 2001-01-17 THR A:80 A:81 145.0 1.0 T -59.7 -56.6 145.0 1.0 0.0 HOH
 2.609
 OG1
 O
1p7q 4 Q8NHL6 81.12 1e-103 X-RAY
 2003-10-14 THR D:80 NA:NA DO NA DO DO DO NA NA NA
1ufu 1 Q8NHL6 81.12 1e-103 X-RAY
 2004-08-10 THR A:80 A:81 143.0 1.0 T -57.7 -54.5 143.0 1.0 0.0
4no0 4 Q8NHL6 81.54 2e-103 X-RAY
 2014-11-19 THR D:78 D:81 136.0 0.971 S -110.2 56.5 136.0 0.971 0.0
6ewa 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 THR D:78 NA:NA DO NA DO DO DO NA NA NA
THR H:78 H:81 142.0 1.0 T -68.9 -59.1 NA NA NA
6ewc 4 A0A0G2JQ44 81.54 2e-103 X-RAY
 2018-11-07 THR D:78 D:81 122.0 0.871 T -42.0 101.3 122.0 0.871 0.0
THR H:78 H:81 122.0 0.871 T -42.2 101.3 NA NA NA
6ewo 4 D9IDM8 81.54 2e-103 X-RAY
 2018-11-07 THR D:78 D:81 137.0 0.979 S -138.6 46.1 137.0 0.979 0.0
THR H:78 NA:NA DO NA DO DO DO NA NA NA
1vdg 1 Q8NHL6 80.1 3e-102 X-RAY
 2005-08-02 THR A:81 NA:NA DO NA DO DO DO NA NA NA
THR B:81 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q8n423-f1 1 Q8N423 100.0 0.0 ARG A:103 A:103 138.0 0.613 T 48.2 47.9
af-o75019-f1 1 O75019 84.62 0.0 HIS A:103 A:103 157.0 0.805 T -58.8 -25.8
af-q8n6c8-f1 1 Q8N6C8 81.12 0.0 HIS A:103 A:103 196.0 1.0 T -54.6 -29.2